Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste7g02140 | CTGAGAGTGAAAGCTAGAGAGACGTTAACATTTGGTAATGGTAACACCTTCAAACTTGAAATCAAATTTGTTGGTGAGAGAGTGAGAGTGAGAGTGTGAGTGTGCACTGCAGGGAGTATTAGAATTAGAATCTCACAATCCTTTTCGGAGAAAGCCACACGTCTTCATCATTACATCGTCTTTTCTTTCAATGAAACAACCTTAGCGGTCCCTTCATATATCCTTAAACCCACCTCACATTTCCTGCTTACCGTTATGTCCCAACCCACGTTCCCAGTATCTTCTTATCTGCATCGCTCCTGATAACTGCCCCATTTGCCTTTTCCCACCCAAAACACTTTCTTTCCTTTAAAAATGGATGCTTTATCTAAGAATAACGGACATGGAAATTCTCAAAGCAAAAAAGATGGGCTTTTGTCTTGTCCCACCACAGATTCCAGTGCAGACTCTAGAGAAACCAGTTTCTGTGGATCCAGTTCTTCAGTTTCTACCCAAGAACCAAACGCAAATGGGTCTCCTTCACCTGCTCCTCTTGGTTGGCCTATTCTCCAGGCTACAATCTCCAACCACTCAAATTCTGACCATAAACAAAACAAGCATAAATCCCATTTGGAAGGCAAAGATTTTACCAGTGTTGGTTTGAAATTTTCAGAAGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCAAATGCCATCACTAATCTGTGCGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGCGAAGAGAGATAGAATGGCTAGTTAGTGTTAGTGATTACATCGTTGAGTTAATGCCTTCTTGGCAAACATTTCCTGATGGGAGTAAGCTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTTTATCAATCTTCCAGCTCTCCGCAAACTTGACAACATGCTTCTCGAAATTTTAGACGGTTTCACGGCTACAGAGTTCTGGTATGTAGACCAAGGGATTGTAGCTGCGGATGCGGATGGTTCAGCCTCTCTTCGCAAAATAGTTCAACGGCAAGAAGAGAAATGGTGGCTTCCTGTACCTCGTGTCCCTCCTGCCGGCCTCAGTGAAGACTCAAGAAAGCAGTTGAATCACTCTCGAGAATGTGCAAGCCAAATACTGAAAGCAGCCATGTCTATCAACAACATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAATTCTCCCCGGAGTGCCTTCTTGATTGCTTAGACATATCCTCTGAACATCTTGCACTAGAGATTGCTAATCGTGTGGAAGCAGCAATTTATGTGTGGCGCCGAAGAACTAATACCAGGTCTTCACCTAACCCCAATCGTTCTACCGCAAAATCATCATGGGAAATAGTGAAGGACTTCATGGTTGATGGAGATAAGAGGGAACTACTAGCAGATAGAGCTGAAAACATTCTAGTTTCCTTGAAGCAGCGGTTCCCAGGCTTAAGTCAAACTACCCTTGATACCAGCAAGATCCATTGCAATAAGGATGTTGGAAAATCTGTATTAGAGAGCTACTCAAGAGTTTTGGAGAGTATGGCTTTTAACATTGTGGCCCGCATTGATGATTTGCTATATGTGGATGACCTGACAAAGCATTCAGAGAGGTTTGCATTGGTTCCCACTAGTACAGTTAACGTGGTTTCTCAGCAGAAGAAAGTTAAGCGTCCACTCTCAGTGTCTGTCTCAGGCACTACTCCACACAAAGGAGCAGTTGGCACACCTAGCTTTTCACCTGCAGCGTTGCCACTAATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCAACAACAATAACAACAGCATCAAATCTCATCGTCGTGGCTTTGGGGTGAGGAGAGTGTTGTCAAATTATCTTGGAGTAGAGGCAAAGACTACCAAGATATGCAGCAACTCAACTGAAGTGAAATGTTCAAACCCAAGTAGCAAGAAAACTGAACAACAACGTCACAAGGAACCATGCACCCCTAAAAAACAGAACTAAATGACTACTAGCTAGTATTATCCATTAGAGCATCACAAACTATTACAAACCATTTATTATTAGTTTTTAAACTTTTTATTTATATCATTCATACCAACATATGTATTTATTGGTAGTTGGGAATTCAAATTCATAGTGTTTTATTACATTAGCGTACTGAGATCTAGAGCAGTTGGTATCCAAGTTTTAGAATTTAAATACAGGACAGTTGGTATTCATGTTCTTGAGTAAATATATGTGCTATGAATCACG | 2397 | 0.4164 | MDALSKNNGHGNSQSKKDGLLSCPTTDSSADSRETSFCGSSSSVSTQEPNANGSPSPAPLGWPILQATISNHSNSDHKQNKHKSHLEGKDFTSVGLKFSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWRREIEWLVSVSDYIVELMPSWQTFPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDGFTATEFWYVDQGIVAADADGSASLRKIVQRQEEKWWLPVPRVPPAGLSEDSRKQLNHSRECASQILKAAMSINNIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSPECLLDCLDISSEHLALEIANRVEAAIYVWRRRTNTRSSPNPNRSTAKSSWEIVKDFMVDGDKRELLADRAENILVSLKQRFPGLSQTTLDTSKIHCNKDVGKSVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTSTVNVVSQQKKVKRPLSVSVSGTTPHKGAVGTPSFSPAALPLISPARGERTPFLNNNNNSIKSHRRGFGVRRVLSNYLGVEAKTTKICSNSTEVKCSNPSSKKTEQQRHKEPCTPKKQN | 596 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste7g02140 | 596 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
| Pste7g02140 | 596 | MobiDBLite | consensus disorder prediction | 569 | 596 | - | - | |
| Pste7g02140 | 596 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
| Pste7g02140 | 596 | MobiDBLite | consensus disorder prediction | 579 | 596 | - | - | |
| Pste7g02140 | 596 | Gene3D | PRONE domain, subdomain 1 | 95 | 333 | - | - | |
| Pste7g02140 | 596 | Gene3D | PRONE domain, subdomain 1 | 334 | 473 | - | - | |
| Pste7g02140 | 596 | FunFam | Rop guanine nucleotide exchange factor 1 | 93 | 332 | - | - | |
| Pste7g02140 | 596 | Pfam | PRONE (Plant-specific Rop nucleotide exchanger) | 99 | 467 | IPR005512 | GO:0005085 | |
| Pste7g02140 | 596 | ProSiteProfiles | PRONE domain profile. | 91 | 473 | IPR005512 | GO:0005085 | |
| Pste7g02140 | 596 | PANTHER | ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 | 18 | 531 | IPR038937 | GO:0005085 | |
| Pste7g02140 | 596 | FunFam | Rop guanine nucleotide exchange factor 14 | 333 | 472 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste7g02140 | Pste-Chr7 | 19601045 | 19604661 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste7g02140 | 7 | 19601045 | 19604661 | Pste7g02140 | 7 | 19601045 | 19604661 | ECH | |
| Pste7g02140 | 7 | 19601045 | 19604661 | Pste8g01322 | 8 | 7049429 | 7052848 | ECH | |
| Pste7g02140 | 7 | 19601045 | 19604661 | Pste8g01322 | 8 | 7049429 | 7052848 | PCT |