Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01110 CACCAATGCAGTTTTTTGTTCAGTGTGCCGAGAAATCGTAACACAGATTCATTCACCTACCCTTTCTTCTCTCTATAGCCGCCTCTCTCTCTTGCATACTCCGCCGATTTCACTTTTCTCTTAAACCATCGAATGAGTCCTTTTTTTACGATACCCCTGAAGCCGTTCATCTGAATATTGTTTTCTTTCTCTTTTTGATTTGCACCACATCACAAAAGAATCGAAAAAAAAGGGTCTTTAGGAGGTTCTGACTGATGGGTGGGAGAGGGATCAAGCTGTTTGATGAAGAAAGGAACGGTCTTTTTTCGATTTCCAATTTTGGATCTCAATGGGGTGGTGGAGTTAGCGACCCTGTGGCTTTGTTTGCGAGTGTGAGTCAAATGGGGATGGGGTTTGGTGTTCAGGAACCGAACCCTTCTTCTTCTTCTTCTTCCGATTCGCAGCAGCACAATGGTGGCAGGAGCATGAGGATTCCGTGCACCGAGTTGTACGTGAGGTATGTGCAATCGGAGGGGAAGGTGAAGATTCTTGGGGTGCCTGATGAGGGAGAGGTGGTGGAAGGGGTTAAGAGGAAGAAAAAGGGTGTCTTTAAAGGGTTGAGGATTAAGGTGAAGAACCCTTCTCTTAGGAGGTTGATTAGTGGTGCGTTTGCTGGGGCAGTGTCACGCACCACTGTGGCACCCTTGGAGACCATAAGGACTCATTTGATGGTTGGAAGTAGTGGCAATTCCACTTCTGAGGTGTTCGGGAATATCATGAAGGCTGATGGGTGGAAGGGGCTGTTTAGGGGTAATCTTGTTAATGTGATTCGTGTTGCACCTAGCAAGGCCATTGAGTTGTTTGCATATGATACTGTTAACAAGAACCTCTCACCAAAGCCAGGGGAGCAGCCCAAACTCCCTATACCATCATCATTGATAGCAGGAGCTTGTGCTGGAGTGAGTTCAACTATATTGACATATCCTCTAGAATTACTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGTTGGTCTACTAGATGCATTCCTGAAAATAGTTAGAGAAGAGGGTGCTGGAGAACTATATAGAGGCCTCACTCCCAGTCTCATTGGAGTAATTCCATATTCTGCCACCAATTACTTCGCGTATGACACCTTGAGGAAAGCATACAGAAAAATCTTCAAAACAGAAAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCTATTTCAAGTAGTGCCACCTTTCCACTTGAAGTGGCACGCAAGCACATGCAAGTGGGTGCTCTAAGTGGAAGGCAAATTTACAAAAACGTGATTCATGCCCTTGCTAGCATTCTTGAGAAAGAAGGGATAGAAGGATTGTATAAAGGGTTGGGACCAAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGAGGAAGATGATGAGGAGTAGAATGAGGCATAATAGTATTTTAGAGCTAAGAGGTAGAATTGAATTCTTCAATTTTGCATATTTGGTTTAAAATTATTTTGGATTTGTTTAATATTACTGAATTATTTATCACATAGGAACCTTTGATAAGCA 1604 0.4358 MGGRGIKLFDEERNGLFSISNFGSQWGGGVSDPVALFASVSQMGMGFGVQEPNPSSSSSSDSQQHNGGRSMRIPCTELYVRYVQSEGKVKILGVPDEGEVVEGVKRKKKGVFKGLRIKVKNPSLRRLISGAFAGAVSRTTVAPLETIRTHLMVGSSGNSTSEVFGNIMKADGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPSSLIAGACAGVSSTILTYPLELLKTRLTIQRGVYVGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKTEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQIYKNVIHALASILEKEGIEGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEEDDEE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 126 139 IPR002067 GO:0055085
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 272 290 IPR002067 GO:0055085
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 179 199 IPR002067 GO:0055085
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 139 153 IPR002067 GO:0055085
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 318 340 IPR002067 GO:0055085
Pste8g01110 405 PRINTS Mitochondrial carrier protein signature 230 248 IPR002067 GO:0055085
Pste8g01110 405 PANTHER SOLUTE CARRIER FAMILY 25 118 398 - -
Pste8g01110 405 MobiDBLite consensus disorder prediction 48 70 - -
Pste8g01110 405 Gene3D Mitochondrial carrier domain 117 403 IPR023395 -
Pste8g01110 405 ProSiteProfiles Solute carrier (Solcar) repeat profile. 309 397 IPR018108 -
Pste8g01110 405 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 204 IPR018108 -
Pste8g01110 405 Pfam Mitochondrial carrier protein 215 302 IPR018108 -
Pste8g01110 405 Pfam Mitochondrial carrier protein 309 400 IPR018108 -
Pste8g01110 405 Pfam Mitochondrial carrier protein 122 205 IPR018108 -
Pste8g01110 405 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 299 IPR018108 -
Pste8g01110 405 SUPERFAMILY Mitochondrial carrier 122 393 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01110 Pste-Chr8 5773782 5778276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01110 308 405 Organic Solute Cotransporters AT4G32400 31.000 4.63e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01110 8 5773782 5778276 Pste8g01110 8 5773782 5778276 ECH
Pste8g01110 8 5773782 5778276 Pste2g01778 2 18192543 18194033 PCT