Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01778 CACTAAACAAAACAAAAAAAAACAAAACCTTGAGATATTCAGTTGCTACAAGTAGAGGAGAAGAGACACAGCATACACAACAACATCTTCATTCATTTACCCCACTTTCCTTTACAACCTCACTCTTTGGACTTTTTCTTAGAATGACAATTTCACATTCTCTCTGAAACCATGACTGTGAGGGACAGTAATCGTTGAGCCTTAGCAGAAAGAAAAAAAACAACCTTTATCACATATCACAACTTACAAGGCCTTTTTGGTTGATGGGTAGAAGGGGAATCCAACTATTCGATGAGAAAAGAAATGGGTTTTTCTCTGTCACCAATTTGGGGTTCCAATCCGGAGATGGGTACTATCAATTTGGAGGTTTATTTGCCAGCGTTGGACAGATGGGAATGGGGGTTGGCATGCAACCCAGCGACCCTTCTAATTCACGTGACAATGGTGGCATGAAACTTCCCTTCAATGAATTGTCCCTCAAGTATGTTCAATCACAGGGGAAAGAAGAGGTTGTTGGGGAGAAGAGAAAGGGTGGTCTTACACTGAAGCTTAAGATCAGAAACCCTTCTTTGAGGAGGTTGTTTAGTGGGGCAATTGCTGGGGCTGTGTCTCGGACTGCTGTGGCGCCTTTGGAGACTATAAGGACTCTCATGATGGTGGGGAGTAGTGGCCATTCCACCACTGAGGTGTTCCACAATATTATGAAAACTGATGGCTGGAAGGGATTGTTTAGGGGCAATCTTGTAAATGTCATTCGGGTTGCACCTAGCAAGGCCATTGAGCTTTGGGTTTTACCTTCTGGATTGGAGCCAGGATGGAATTGTGGATTTAAGCAGGTTTTGCAGGAGTCCCTTGTGAACTTCAGAGACGAGTTCACTATAGATGAGCTTTCTCCTATTTTAATCTACCATTTAATCATGTTTCTTTCTTTGGAATGA 938 0.4275 MGRRGIQLFDEKRNGFFSVTNLGFQSGDGYYQFGGLFASVGQMGMGVGMQPSDPSNSRDNGGMKLPFNELSLKYVQSQGKEEVVGEKRKGGLTLKLKIRNPSLRRLFSGAIAGAVSRTAVAPLETIRTLMMVGSSGHSTTEVFHNIMKTDGWKGLFRGNLVNVIRVAPSKAIELWVLPSGLEPGWNCGFKQVLQESLVNFRDEFTIDELSPILIYHLIMFLSLE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01778 224 PRINTS Mitochondrial carrier protein signature 118 132 IPR002067 GO:0055085
Pste2g01778 224 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Pste2g01778 224 PRINTS Mitochondrial carrier protein signature 105 118 IPR002067 GO:0055085
Pste2g01778 224 Pfam Mitochondrial carrier protein 102 176 IPR018108 -
Pste2g01778 224 SUPERFAMILY Mitochondrial carrier 101 176 IPR023395 -
Pste2g01778 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 100 183 IPR018108 -
Pste2g01778 224 Gene3D Mitochondrial carrier domain 60 182 IPR023395 -
Pste2g01778 224 PANTHER SOLUTE CARRIER FAMILY 25 100 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01778 Pste-Chr2 18192543 18194033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01778 1 177 Organic Solute Cotransporters AT4G32400 58.602 3.73e-59 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01778 2 18192543 18194033 Pste2g01778 2 18192543 18194033 ECH
Pste8g01110 8 5773782 5778276 Pste2g01778 2 18192543 18194033 PCT