Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00692 CCAACATCTCGAAATAAAAATAAAAGGCAGAGAGCTGGTGATGATGGCAGTGACACTTCTGATATATGGAGGAAGATTCACAAAACAGGTGCAGTGACTGAAGATGATATGAACTTGCTGTATATGATTTGGAAGCCAATTTGTTCAGGCTGTCGTGTTAATAGTAAAAACAATCCAAATTGCTTCTGTGCATTGGTTCCACCTCCAAATGGCACCAGGAAGTCTGGGTTATGGCAGAAGATGTCAGACTTTGTTGAAAGTCTCGGCTTTGATCCAACTACATATCTTCGTGCATCTGATAGTTCACCTGCAGGTCTTACAAATCTTGGTGCAACATGCTATGTCAACAGTATACTACAGTGCTTGTACATGAATAAATCTTTCAGAAAAGGCATATTTTCTGTAGAACCGAATGTTTTACAACAACAACCGGTGTTAGATCAACTGACCCGGCTTTTTGTACAGTTACATGTTAGTAAAATGGCTTTCATAGATTCTTCTCCATTTGTGAAAACACTGGAGTTAGACAATGAAGTTCAGCAGGATAGTCACGAGTTTCTAACATTGCTTCTGTCATTACTTGAGCGTTGTTTGGGTCTTTCCAAAATTGCCAAGACAAGAACAATAGTTCAAGATCTTTTCCGAGGAAGTGTGTCTCATGTGACAACGTGTTCGCAATGTGGAAGAAACTCTGAAGCCTCTTCCAAAAGGGAAGACTTCTATGGGATAGAGTTGAATATCAAGGGACTGAAAGGTTTAAAAGAGAGCCTAGATGATTACCTTGCTATTGAAGAACTTCACGGAGACAATCAATATTTTTGTGAGTCATGTAAAACAAGAGTTGATGCTTCTCGCAGCATCAAGCTGTGCACGTTACCTGAAGTACTCAATTTTCAACTTAAACGTTATGTCTTCCTTCCACAGCATACAATGAAGAAGAAAGTTAACTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGACATAGATTGTCTGAGCCATCTCAGTTTGAATTGGTATATGATTTGTCAGCTGTACTGATTCACAAAGGAACTACTGCTAATAGTGGTCACTACATTGCCCATATAAAGGATAAAAATACTGGGCAATGGTGGGAATTTGACGACGAGAATGTTACTAACTTGGGTTGTCATCCTTTTGGGGAAGGAGCTTCATCTTCTACTTCTAAATCTGTTAAGGCAGCTGAACTTCATTCTAATTGCTCTGGTGCAATGCTAGCTGACATCAACAGTTTAAATGCCACTCATTCACAATCTTCTCTTGTGGAGGCATTTTCATCTAGGGATGCATACATGTTGATGTACCATATTAAGCATAGGGAAAATGATGGTGGAAAGAAGGACTTGATTTATGGTGCTAACCATAAAGAAGAGGGCAATGCAGTTACTGCACAAGACTCTGCTTGTCTTCCTTCTCATCTTTGTGAAGACATTCAAAATTTCAACGCCTCATATCTTGATTCTTGCAAGCAGTATGAACAAAGGAAACAGTTGGAATTGAGTCGTATCGATGAGAGGAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCTCCTACTCAACCACTAGAGCAACCATATTTTTGGATTTGTAGTGACTGGCTTCGCCAGTGGGCTGACAGCATTGATCCAATTGCTCTTGACAATACATCTATCCAATGTTCACATGGGAAAGTCCCAGTGTCAAATGTTACATCAATGAAGCGATTATCTTCTAAAGCATGGGATAAACTATTGTTTAAATATGGTGGGGGACCAACACTTTCTCATGATGACTGCTGTTGGGATTGTCTGATTGATGGGGCTAAGAATGTGGTGTCAGCAGACTCCTATCGGGAACAAAGGGAATCATTGAAGCAACTTGCACGGTTGCAGCAATGGTGGAAAAGAAAAGTTGGTGATGGTCCATCAGAAGCTGATGCTGGACCAACAGTAGCCATTAGTTGTCCACACGGGCAACTTATGCCTGAGAATGCTGTTGGTGCTAAGCGATTGCTTGTTCCGGAGGGTTTCTGGCTTTTCTTATACAAAGATGCCATTTCTGTAAAATCTGATGATCCTCTAGGTTGCCCTACTTTTCCTATAGACTCCAGAGAGTGTTCACAATGCAGTGAGGAATTATCTGAAGTGACTGGCTTGGAAGACTCTTTGAGATTAGTAAAACAAATGCACCGCCAAAATCATGAGAAATTATTTGTTAGTAAAAGTATGCCACTCTCACTACATAGTAGATATTTCTTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATTAACTTGGCTGTCAAGAATTCAGATAAACCAGAAACTTTAGATGGGGTAATTGATTCATTGAAGTGTGAAAAGCACTCACGACTTGTTGAAAGGCCTCCGGAACTAGTAAGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGCTTCTGCGAAGAATGGGGTGCTATTGAGACCAAAGGAATATCTGCAAGAATTGAGAATGTTAATGATTTAGAAAATGCTTTGACCGGATCCTACAAAGAGATGCCAATATGTAACGATCAGCGTTACACTTGCAATAAAGTAAATAATGAAATTGGGAATGGACAACTTGTGATTAAGACTTCTCCTGAGGTTTGTGAAAGTTGCATTATAGAAAAGGAAAGCTGTGAGTTCATGCAGAAACTTAACTATTCCAATGAGAACATTAGTGTAATTTTTATCCGTGGAAAGGAAGTTCCCAAATCAATCTTGGAGGCATCGAAGGGCTTTGTTGAAACAGACAGGCGGGTTTCCAAACGTTCCCGGAAGACTAAAAATGGGAGTTCCATTAGTCTAAAAGTTTCTGCTTCAACATCAATTTATCAATTGAAAATGATGATATGGGAATCCTTTGGGGTAGTCAAAGAAAACCAGATACTACAAAAAGGTGATAGAACAATTGCTGCTGATAATGAATTTGCTACACTTGTGGATGTAAACATATTTGCTGGAGATCAGATTATTTTGAGGGACTCAAAGATTCATGAAAATCGAGATATTGCAGATGAGCTTTGTGGTGAGAAAATGGAAACGCAAGGTACTGAGGCAGGGTTTCGTGGAACACTCTTAGCATCAAATGCTTCATCTCAAGTTGTTTAGGAAACAGACTTTGAGTGATATCATCTTTTCTTTTATTTTCTGGTCTATATATATATATATATATAGTTTAAC 3213 0.3918 PTSRNKNKRQRAGDDGSDTSDIWRKIHKTGAVTEDDMNLLYMIWKPICSGCRVNSKNNPNCFCALVPPPNGTRKSGLWQKMSDFVESLGFDPTTYLRASDSSPAGLTNLGATCYVNSILQCLYMNKSFRKGIFSVEPNVLQQQPVLDQLTRLFVQLHVSKMAFIDSSPFVKTLELDNEVQQDSHEFLTLLLSLLERCLGLSKIAKTRTIVQDLFRGSVSHVTTCSQCGRNSEASSKREDFYGIELNIKGLKGLKESLDDYLAIEELHGDNQYFCESCKTRVDASRSIKLCTLPEVLNFQLKRYVFLPQHTMKKKVNSAFSFPAELDMRHRLSEPSQFELVYDLSAVLIHKGTTANSGHYIAHIKDKNTGQWWEFDDENVTNLGCHPFGEGASSSTSKSVKAAELHSNCSGAMLADINSLNATHSQSSLVEAFSSRDAYMLMYHIKHRENDGGKKDLIYGANHKEEGNAVTAQDSACLPSHLCEDIQNFNASYLDSCKQYEQRKQLELSRIDERRQEVRSVLAEAPTQPLEQPYFWICSDWLRQWADSIDPIALDNTSIQCSHGKVPVSNVTSMKRLSSKAWDKLLFKYGGGPTLSHDDCCWDCLIDGAKNVVSADSYREQRESLKQLARLQQWWKRKVGDGPSEADAGPTVAISCPHGQLMPENAVGAKRLLVPEGFWLFLYKDAISVKSDDPLGCPTFPIDSRECSQCSEELSEVTGLEDSLRLVKQMHRQNHEKLFVSKSMPLSLHSRYFLVPSSWISKWRNYINLAVKNSDKPETLDGVIDSLKCEKHSRLVERPPELVSGLTIISENDWKCFCEEWGAIETKGISARIENVNDLENALTGSYKEMPICNDQRYTCNKVNNEIGNGQLVIKTSPEVCESCIIEKESCEFMQKLNYSNENISVIFIRGKEVPKSILEASKGFVETDRRVSKRSRKTKNGSSISLKVSASTSIYQLKMMIWESFGVVKENQILQKGDRTIAADNEFATLVDVNIFAGDQIILRDSKIHENRDIADELCGEKMETQGTEAGFRGTLLASNASSQVV 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00692 1046 Gene3D - 722 831 IPR035927 -
Pste8g00692 1046 ProSiteProfiles DUSP domain profile. 508 600 IPR006615 GO:0004843
Pste8g00692 1046 MobiDBLite consensus disorder prediction 1 20 - -
Pste8g00692 1046 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 341 359 IPR018200 GO:0004843|GO:0006511
Pste8g00692 1046 Gene3D Cysteine proteinases 93 445 - -
Pste8g00692 1046 SUPERFAMILY Cysteine proteinases 103 442 IPR038765 -
Pste8g00692 1046 FunFam ubiquitin carboxyl-terminal hydrolase 48 91 445 - -
Pste8g00692 1046 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 104 445 IPR028889 -
Pste8g00692 1046 SUPERFAMILY Ubiquitin-like 937 1009 IPR029071 -
Pste8g00692 1046 CDD Ubl_USP48 936 1039 IPR044743 GO:0004197|GO:0004843|GO:0016579
Pste8g00692 1046 ProSiteProfiles DUSP domain profile. 725 832 IPR006615 GO:0004843
Pste8g00692 1046 SMART dusp 526 597 IPR006615 GO:0004843
Pste8g00692 1046 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 71 442 - -
Pste8g00692 1046 Pfam Ubiquitin carboxyl-terminal hydrolase 105 442 IPR001394 GO:0004843|GO:0016579
Pste8g00692 1046 CDD Peptidase_C19L 105 442 IPR033841 GO:0004843
Pste8g00692 1046 FunFam Ubiquitin carboxyl-terminal hydrolase 26 499 597 - -
Pste8g00692 1046 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 105 120 IPR018200 GO:0004843|GO:0006511
Pste8g00692 1046 Gene3D - 935 1007 - -
Pste8g00692 1046 SUPERFAMILY DUSP-like 508 599 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00692 Pste-Chr8 3631881 3639894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00692 83 382 Miscellaneous Gene Families AT4G31670 29.375 1.25e-26 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00692 8 3631881 3639894 Pste2g01956 2 19841426 19854587 PCT