Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01956 GTAAAGAGCAAAAAAGTGACATGTAGGGGTAGCCTCTGGCACAGGAGCTGAGTCCTCTGACTCAAACTTGACCCATCCATTTCCTCCTCCTTAGTTCTGACATCACATCTCCATCCAAACCCAACAAAGCTCTGTCCTTTATCAATCCCTCCATCCCCTCACTCTCACCCTTTCCTACTCAAGGAATCCCAAGTGTATTTTGATCTTGCAGTTCATACCAACTTCGTATTTCTCATCTCAGATTGTACTTACTATAGAATGAGTAGACCAACAACACGAAGTAAAAATAAAAGGCAGAAACAAGGGGATGATAGCAATGGCACTGGTGAAATTTGGAGGAAAATTCATAATACAGGTGTGGTAACTGAGGATGATATGAATCAACTGTATATGATTTGGAAGCCAGTTTGTTCAGGATGTCGTGTTAATACCAAGGACAACCCAAATTGCTTCTGTGCGTTGGTTCCACCTCAAAATGGAGCCCGGAAGTCTGGCTTATGGCAAAAGTTGTCTGATTTTGTTGAAAGTCTTGGCCATGATCCAACCAAGGATCTTCGTGTTTCTGCTAATTCTCCTGCGGGTCTCACAAATCTTGGTGCAACATGCTATGCCAACAGTATACTCCAGTGCTTGTACATGAACAAATCTTTTCGAGAAGGCATATTTTCTGTAGAACAAGATGTTTTACAGCAACAGCCTGTGCTAGATCAGCTGGCTCGACTTTTTGTGCTGCTGCATATTAGCAAAATGGCTTTCATAGACTCTTCTCCGTTTGTAAAAACACTGGAATTAGATAATGGAGTTCAGCAGGATAGCCACGAGTTCCTTACTTTGCTTCTTTCTTTGCTTGAGCGCTGTTTGAGCCATTCTAAGGTGCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTTTCTCATGTGACAACGTGCTCACAGTGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAGGATTTCTATGAATTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGATGAAAGCCTAGATGAATATCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCATGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGTTGCGTACATTACCCAAAGTACTTAATTTTCAACTTAAACGTTATGTCTTCCTTCCCAAGACTACAACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGAAGAACTAGATATGCGGCATAGAATGTCTGAGTTGTCTCAGTTTGACTTAGTATATGACTTGTCGGCTGTACTGATTCACAAGGGAACTGGTGCTAATAGTGGCCATTACATTGCTCACATCAAGGACGTAAACACTGGACAGTGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTTATCATCCATTTGGTGAAGGGTCTTCAAGTTCTAATATGAAATCCACCAAGACTGATGCAACTCATTCTGATAATTCTGAAGCAATGATAGTGGACAGTAATGGAAGCAGTTTAAATGCCACTCGTTCACAATCTTCGAATGTGGAGACATTTTTGTCTAGTGATGCATACATGTTGATGTATCATCTTAAACATACAAAAAATGTAGGTGAAAGTACGGGTGTAAGCTGTGGTGCTAACCATAAAGAAAGAGAGGGTAGTGTGGCTGCTGTGCAAAATGGTGCTCCTCTTCCATCTCATCTTTATGATGAGATTCAAAATTTCAACACCTCATACAGTGATGTTTGTCAGCAGTACAACAATAGGAAGGAGTTAGAATTGAGTCGTATTAGTGAGAGGAGACAGGAAATTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCTTCGGAGCAGCCATTTTATTGGATTTCAAGTGAATGGCTTCGTCATTGGGCCGACAACATTATTCCAACTCCTCTTGACAACACATCTGTCCAATGCTCACATGGGAAAGTCCCGGTTTCAAAGGTTAGCTCAATGAAGCGATTGTCTGCTAAAGCGTGGGATATGTTGTTCTCCAAGTATGGTGGAGGCCCAGCATTGTCTCATGATAACCACTGTTGGGATTGCCTGATTCATGGGGCTATGACAGTGGTATCCGCTGATACCTATCGGGATAGAAGAGAATCAATGAAGTCACTTGCACGGGATATTCTAGATGGAAACTGTCTAGATGGAAAGTTGCAGCAGTGGTGGAAAAGAAAAGTCCTAGATTCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCTATTAGTTGTCCACACGGTCAATTGATGCCTGAGCAAGCTCCTGGTGCTAAACGGGTGCTTATTCCTGAGAGCTTTTGGCTCTTCCTATATGAAGATGCTGTTTCTGTAAAGCCTGATGATCCATTGGGTGGCCCAACTTTTTCTTCAGATTTTGAAGAGTGTTCCCACTGCAGTAATGAATTATCTGAAGTAGCATGTTTGGAGGACTCCTTGAGATTAGTTAAACATAAACAACGTCAGAATCATGAAAAATTGTTCCAGGCTAAAAGTATGCCACTTTCTCTCCATTGCAAGTATTTCTTGGTGCCTTCTTCATGGATTTCAAAATGGAGAAATTACATTAGTCCAACCCTGAAGAGTTCTGATAAACCTGAAACTCTAGATGGGGTAATTTATTCGCTGTTGTGTGAAAAGCACTTGCAGCTCATTGAAAGACCCCCTGAATTGGTTTTCAGACGTGGTGCTATAATACAGAAGGAGTCTTCTGCAGGTGGCTTAACTATTGTATCTGAGAATGATTGGAAATGCTTCTGTGAAGAATGGGGTGGTATTGAGACCAAAGGAATATCTGCAACAATTGATCATGTTTGTGATTCCAAGAATGTTGTGACTGGATCCAGTGAAGAAATGCTAATGTGTAAGGATCAGTTGGGCATGGCAGATAAAATGAATTATGAAAATGGGACTGGACAAATTTTAATTAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAGAGAGAGTTGTGAGCTAATGCACAAACTCAACTATTGCAATGAGGACATATGTGTGATTCTTGTTCGTGGGAAGGAGGTGCCTCGGTCAATATTGGAGGCTTCGAAGGGATTTGTTGAAACAGATCGGCGAGTTTCCAAGCGTTCCCGCAAGACTAAAAATGGAAGTTCAATTAGTCTAAAAGTTTCTGCTTCAACATCTTTATATCAGCTTAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACATAAAGGTGATAGGATCATTAACAGTGATAATGAATGCGCTACCCTAGCTGATGTGAACATATTTGCAGGAGATCAAATTATAGTGAGGGATTCTGAAATCCATGAAAATCGAGATATTGCTGATGAGCTTTGTGATGATAAAATGGATTTGCAGCATACCGAGGAAGGGTTCCGTGGTACGCTTCTCACAGCAGCAAATGTTTCATCCCAGGTTGTTTAAGAATTGCACTTTGCTGATATATTTCTGTAACATCTTTTTGTTAGTGTATATATATCCAAAAGACAGTTCAATGCAGTAGTTGGATATGTAAATCCGTGTGTCTTGTGCATTTTATCATCCAAAGCCAAGATAAAGGCAAATTTTGGAATGTATTTAATTATTTATCTACTAGTGACTAGTGGAACACACGAGTTCATTAAAAGATGATGAGTTCAAG 3709 0.4052 MSRPTTRSKNKRQKQGDDSNGTGEIWRKIHNTGVVTEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPQNGARKSGLWQKLSDFVESLGHDPTKDLRVSANSPAGLTNLGATCYANSILQCLYMNKSFREGIFSVEQDVLQQQPVLDQLARLFVLLHISKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDEYLTVEELNGDNQYFCESCKTRVDATRSIKLRTLPKVLNFQLKRYVFLPKTTTKKKITSAFSFPEELDMRHRMSELSQFDLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGYHPFGEGSSSSNMKSTKTDATHSDNSEAMIVDSNGSSLNATRSQSSNVETFLSSDAYMLMYHLKHTKNVGESTGVSCGANHKEREGSVAAVQNGAPLPSHLYDEIQNFNTSYSDVCQQYNNRKELELSRISERRQEIRSVLAEAPVQPSEQPFYWISSEWLRHWADNIIPTPLDNTSVQCSHGKVPVSKVSSMKRLSAKAWDMLFSKYGGGPALSHDNHCWDCLIHGAMTVVSADTYRDRRESMKSLARDILDGNCLDGKLQQWWKRKVLDSPSEADAGPTAAISCPHGQLMPEQAPGAKRVLIPESFWLFLYEDAVSVKPDDPLGGPTFSSDFEECSHCSNELSEVACLEDSLRLVKHKQRQNHEKLFQAKSMPLSLHCKYFLVPSSWISKWRNYISPTLKSSDKPETLDGVIYSLLCEKHLQLIERPPELVFRRGAIIQKESSAGGLTIVSENDWKCFCEEWGGIETKGISATIDHVCDSKNVVTGSSEEMLMCKDQLGMADKMNYENGTGQILIKTCPEVCESCIGERESCELMHKLNYCNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRKTKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIINSDNECATLADVNIFAGDQIIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTAANVSSQVV 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01956 1077 ProSiteProfiles DUSP domain profile. 742 862 IPR006615 GO:0004843
Pste2g01956 1077 Gene3D Cysteine proteinases 91 450 - -
Pste2g01956 1077 Gene3D - 965 1036 - -
Pste2g01956 1077 Gene3D - 739 858 IPR035927 -
Pste2g01956 1077 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Pste2g01956 1077 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 71 449 - -
Pste2g01956 1077 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Pste2g01956 1077 MobiDBLite consensus disorder prediction 389 409 - -
Pste2g01956 1077 CDD Ubl_USP48 966 1067 IPR044743 GO:0004197|GO:0004843|GO:0016579
Pste2g01956 1077 MobiDBLite consensus disorder prediction 10 24 - -
Pste2g01956 1077 FunFam Ubiquitin carboxyl-terminal hydrolase 26 505 603 - -
Pste2g01956 1077 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Pste2g01956 1077 ProSiteProfiles Ubiquitin domain profile. 967 1033 IPR000626 GO:0005515
Pste2g01956 1077 ProSiteProfiles DUSP domain profile. 514 606 IPR006615 GO:0004843
Pste2g01956 1077 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Pste2g01956 1077 SUPERFAMILY DUSP-like 515 606 IPR035927 -
Pste2g01956 1077 SUPERFAMILY Cysteine proteinases 105 451 IPR038765 -
Pste2g01956 1077 SUPERFAMILY Ubiquitin-like 967 1034 IPR029071 -
Pste2g01956 1077 SMART dusp 532 603 IPR006615 GO:0004843
Pste2g01956 1077 MobiDBLite consensus disorder prediction 1 25 - -
Pste2g01956 1077 Gene3D - 505 606 IPR035927 -
Pste2g01956 1077 FunFam ubiquitin carboxyl-terminal hydrolase 48 94 450 - -
Pste2g01956 1077 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01956 Pste-Chr2 19841426 19854587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01956 105 436 Miscellaneous Gene Families AT4G31670 28.378 2.22e-27 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01956 2 19841426 19854587 Pste2g01956 2 19841426 19854587 ECH
Pste8g00692 8 3631881 3639894 Pste2g01956 2 19841426 19854587 PCT