Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00645 ATGGATCAAAAGTTTCGGATGAACGAGGACTTACTAATTTCTAATTCCCTTCATCGCTTAATTCATAAGGATTCAACGAACTGGCCTTTGATTGCACCCTTGCTATCTTCTGGAAGAGGAGGTGAAAATGGTACAATTGATGGTCAAGGAGATGCGTGGTGGAATAAGTGGAGGCAGGGAACTCTTCAGTTTACCAGACCAAACCTTGTTGAATTTGTTAATTATAGAGATATTATTATTTCAAATGTAATCATCAACAGTTCTCTTCCTGGAACATTCACCCAGTTTACTGCAGATTCAAATTCAAATGTATGCATAGAGGATTCATACAACATGGGAATTGGTCTCCACATTAAGACCAACACTGGTAGGGGTGGATTTATAAAGAATATAACCACGTCTCATGTGTACATAGAGGATGCAAGGAAGGGAAATAAGATCACAGGTGATGCTGGGGACTACCCTGATGACAAATGTGATCCCAATGCTCTTCCACTTGTCAAGGGTGTCACAATTAAGAATATTTGGGGTGTGAAGGTTTTGCAGGCTGGTTTGATTATTTCACCCATATTTGCTTATATGATATCAACCTTCATGGATTGA 603 0.393 MDQKFRMNEDLLISNSLHRLIHKDSTNWPLIAPLLSSGRGGENGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNYRDIIISNVIINSSLPGTFTQFTADSNSNVCIEDSYNMGIGLHIKTNTGRGGFIKNITTSHVYIEDARKGNKITGDAGDYPDDKCDPNALPLVKGVTIKNIWGVKVLQAGLIISPIFAYMISTFMD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00645 200 Gene3D - 35 91 IPR012334 -
Pste8g00645 200 PANTHER PECTIN LYASE-RELATED 40 86 - -
Pste8g00645 200 Gene3D - 92 188 IPR012334 -
Pste8g00645 200 SUPERFAMILY Pectin lyase-like 41 180 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00645 Pste-Chr8 3353423 3361712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00645 23 186 Glycoside Hydrolase AT5G41870 33.212 1.36e-35 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01006 7 9218872 9224142 Pste8g00645 8 3353423 3361712 PCT