Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00591 ACTGAAAAGGAGATTGCCCCAGGAAACAAGATTTTACGGGAACATTCATTGGTTAACCTTAACCAAACACAGAAGAAAGAAAGGAACCAAACAAGTTCTGAAAAAACTTAAATCAAAAGTCTGTGTTGTGTTGTGTCTCTCTCCACCATGGCTCTCATGACTCGAACGGGAACCACTTGGCGCCTCCCTCAGCGGCTAGTTTCCGCGTCCCTCTACAGTAGTTCCTCCGGCGCCGGACTTCCCACAAACTACTGTGCGCCGCCGCCGACTGCGACTTCCTCCCCCGTGGGGTTGTCGAAACCGGCGGAATACGTGATCTCGAAGGTGGACTCGCTCATGAACTGGGCCCGCACCGGGTCCATTTGGCCCATGACGTTTGGGCTGGCCTGCTGCGCCGTCGAGATGATGCACACCGGTGCGGCCCGCTACGATCTGGACCGGTTTGGAATCATCTTCAGGCCCAGCCCACGTCAGTCCGATTGCATGATCGTCGCTGGCACACTCACCAACAAGATGGCCCCTGCCCTTCGCAAGGTATATGATCAAATGCCAGAGCCAAGGTGGGTGATATCAATGGGAAGTTGTGCAAATGGAGGAGGATACTACCACTATTCTTATGCTGTTGTCAGAGGATGTGACAGGATTGTTCCTATTGATATATATGTTCCAGGTTGTCCTCCAACTGCTGAGGCTTTGCTATATGGCCTTCTCCAGCTCCAGAAGAAGATCAACAGGCGCAAGGACTTTCTCTGGTGGTGGACCAGGTGATCCCACTGCCACCCAAGACAAATCATTTTTATTTCTTCTCTGTTCAAACCTTCTTCACAATGTATTTATGTTCATCAACCTTCCAATAAATGTCACACCTCATGTTTAACTTACATATGAGATTGGGAATAAATTTTCTACTTTGC 914 0.4967 MALMTRTGTTWRLPQRLVSASLYSSSSGAGLPTNYCAPPPTATSSPVGLSKPAEYVISKVDSLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPIDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLWWWTR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00591 206 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 162 178 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste8g00591 206 SUPERFAMILY HydA/Nqo6-like 54 203 - -
Pste8g00591 206 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 47 195 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste8g00591 206 NCBIfam NADH-quinone oxidoreductase subunit B 56 196 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste8g00591 206 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 81 190 IPR006137 GO:0051536
Pste8g00591 206 PANTHER NADH DEHYDROGENASE 50 205 - -
Pste8g00591 206 FunFam NADH-quinone oxidoreductase subunit B 2 48 206 - -
Pste8g00591 206 Gene3D - 52 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00591 Pste-Chr8 3052933 3055143 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00591 8 3052933 3055143 Pste8g00591 8 3052933 3055143 ECH
Pste8g00591 8 3052933 3055143 Pste2g01280 2 14125447 14128028 PCT