Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01280 GTTTTGGCAAAGAAGGTGATTAGGATTTGTGGAAAAAATAGAGAAAGGTTTGGTTCTTGGGCGTAAAGAAGAAAGAGAGAGAGTCCTGAAACTAAGGTGCGATTCCTTGGGTGGTGGCGTGACTGTTGACTATGGCTCTTCTGAATCGAGCCTCTTCGCGCTTCCCTCAACTGGTCTCCCCTCAAAGAGTGGTTTCTCTGCACACAACGCTCCCTACTCTGAGCGGCGCCACTCCCACACCCACCCCATATGCCCCGCCACCGCCCCCATCCCTCTCCTCTCCCCCCGGCGTCTCCAAGGCGGCCGAGTTCGTGATCTCTAAGGTCGACGATCTCATGAACTGGGCCCGCCGCGGCTCCATCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCCGCCCGCTACGATCTCGATCGCTTCGGCATCATTTTCAGGCCCAGTCCTCGCCAGTCCGATTGCATGATCGTCGCCGGCACCCTCACCAATAAGATGGCTCCCGCTCTTCGCAAAGTTTATGACCAAATGCCTGAGCCCAGATGGGTCATCTCTATGGGAAGTTGTGCTAATGGAGGAGGATACTACCACTACTCTTACTCTGTAGTTCGGGGGTGTGACAGGATTGTTCCTGTAGACATATATGTTCCAGGTTGTCCTCCAACTGCCGAGGCTTTGCTGTATGGACTCCTACAGCTGCAGAAAAAGATCAATAGGCGCAAAGACTTCCTCCATTGGTGGACAAAGTGAGGTCAATTGTTGTTTCTTGGCAGCCAAGCTATTTTATAATAAGCAAAGACATGGTACTTTACCTTGCTAAGAAGCACCCATGTTAGATGGAGATTGTGTCGATAAATTACGTTATCACAGTTTCTGGATGTTCTATGTGCTGCTTTTACTGGGGCTTCAGGTCCCTTCGAAGTTGAATGTTTCTTCTCTATTAATGCTTCATCTGTAGCTGAGAGTAAAACAATTTCTGAATGACTTATGTTTGGTTTGTAAGTTACAGTTTTAACGTTGGACCAATTTCCCTCTCGGCTACTCCTGTTTAATGGCGTTTCAATAAATAGTTTTGAACTGATGGCTTCTTCCCTGCATTGTACTGTACCTTCCACCCTCCCTTTCCTCACCCACTCGCCCTTCCAAAGAAAGAATACAAAGATTCATATTTGTGATGTACTTACACATTTATGTTTGATTTATTATTATGAGTTTAATTGGAATGAATTATAATGTACATTTACACTATAATCTAATTACAATTCTTATAAATAAAGAGATAGAA 1302 0.467 MALLNRASSRFPQLVSPQRVVSLHTTLPTLSGATPTPTPYAPPPPPSLSSPPGVSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01280 211 SUPERFAMILY HydA/Nqo6-like 59 203 - -
Pste2g01280 211 NCBIfam NADH-quinone oxidoreductase subunit B 60 201 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste2g01280 211 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 167 183 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste2g01280 211 PANTHER NADH DEHYDROGENASE 55 210 - -
Pste2g01280 211 MobiDBLite consensus disorder prediction 35 51 - -
Pste2g01280 211 Gene3D - 57 211 - -
Pste2g01280 211 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 86 195 IPR006137 GO:0051536
Pste2g01280 211 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 52 200 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pste2g01280 211 MobiDBLite consensus disorder prediction 28 53 - -
Pste2g01280 211 FunFam NADH-quinone oxidoreductase subunit B 2 53 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01280 Pste-Chr2 14125447 14128028 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01280 2 14125447 14128028 Pste2g01280 2 14125447 14128028 ECH
Pste8g00591 8 3052933 3055143 Pste2g01280 2 14125447 14128028 PCT