Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00346 CTACCTTCTCTCTCTAACTCTCTCTCTCTCTCTCTCTCCCACAACCGCGTCAGACCCTGGAAAACGCTCATGATTCACGTCCCAGACAAAGTGCTTCCCTCCCTTGTTCCAACCATTCCTCGTGATTCGCGCCCCTCCCAACCAAGATCTTCACCGAATCCCCTTCATTTAAACCAAAGGCGGCGACCATTTATTTCATTCTAAACCCCCTTCTCTGACGCCATTTTTCTCCGTGCACCCCTCAATTCAAACAAAACGCATTTATTTCATTCCCACTTCCAAACACGCTTCCGCCCTTCCACAACCTTCTCACTCACTCCCTCAAATGCGCACACTAAATGCTTCTCAGAACAACACCACCTTCGTCAACAACAACCTTCATACGTAGTACCACCGCTACTGCTGCTACTCTCTCCTCACACGCTCGCACGTGCGCCCGCCCGCGCTCTTCTTTCTTCCTTTCTCTTGTTTCCAAACCAACCAAACGCTGCTCTGCCTTGTCGTTTTCTCTGAAACAGCACAACAACCTTCTGTTTTGTTTCACTTCTGTATTATTCTTTTCTCGTTCGCTTTCAAGGAGAGAAAACTAGTAAACTACAACAACAAAAAAAAAAACAAAAAACAAAATGAAGTTTATGAAGTTGGGTTCCAAGCCTGACGCTCTTCAAACTGATGGAAAATCTATCAGGTATATATCATCTGAATTAGCTACTGATATTATCATAACTGTTGGTGAAGTTAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATCGTTTACAAAAGTTGCTGTCAAAGATTAATGATGAGAATTCTGATGAAATTCAATTGGATGATTTTCCTGGTGGTCCCAAGGCCTTTGAAATATGTGCAAAGTTCTGTTATGGAATGACTGTTACTCTTAATGCCTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTACCTTGAGATGACTGAGGATATTGAAAGAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCAAGTATCTTCCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGCCATGGTCTGAGGACCTAAAGATTGTTGGGAGATGTATAGATTCCATAGCTTCTAAAACTTCTGTAGATCCAGCAAGCATCACCTGGTCTTACACTTATAATCGGAAATTAGCAGAGCTTGATAAAATTGTTGAGGACAAGATAACACAACAAGAAAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAGGATATATGTGAGCTGGACATTGATCTTTATAAACGAGTAATGATTACTGTCAAGTCAAAGGGAAGGATGGACGGAGTTGTGATTGGCGAGGCATTAAAAATCTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCTGATGCCCATGCTTGGAGGAACAAATCTCTGGTAGAAACCATTGTATGTTTGTTGCCATGCCATAATGGCATTGGTTGTTCATGTAGTTTCTTGCTGAAGCTGTTGAAAGTGGCCATATTAGTTGAAGCTGACGAGTCTTCAAGAGTGCAGTTGATGAAGGGCATTGGCCTTAAGTTGCATGAAGCTTCTGTCAAAGATTTGCTGATTCCGGCAAGGTTTCCCCAGAATACCAAATATGATGTTGATTTGGTGCGAGATCTTTTGAATCTATACATGACTAACATAAAGGGAAGCCATGATGTTGCGGTTGAGGAGAAGAAAGATAAAGCGAATGACGAGTCTGTTTTAGGACATAGGTTTCTACTGAAGGTTGGCAATTTGGTAGATGGTTATCTTGGAGAAATTGCACATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATTTGTCACTGTCAATTCCAGAGTTTGCTAGATCGAATCATGATGGTCTGTATAGAGCTATTGACATCTACTTGAAGGAGCACCCGAGTTTGACAAAAGCTGAAAGAAAGAAGCTTTGTGGACTAATGGATGTCAAGAAATTTACAGTGGATGCATCAACGCATGCAGCACAGAACGAACGGCTTCCACTTCGAGTTGTGGTGCAGGTTCTCTATTTTGAGCAGGTCAGAGCTGCTACCAATGCTCGGGCACTTAGTAACAGTCCACGCAATCCCTCGAATGCTCTCGCGGATGGTGACGAGGAATGTGAGAAATCTGGGGGAGAAAGCTGCCAATCCCTCAACAGCCAGATGTGTCACATGAAGATTAGAGATGAAGAGTGTCATAAGAATGGAAAGTTGAACAAGAAGAGTAGCAAGAACAGCAGAAGTGGCATGCAGTTGCTGCCATCAAGGTCAAGGAGAATATTTGACAAGTTATGGAATGTGGGGAAAGGACAAGGAGAAAATAGAAGCTCAGAGACTTCAGGGAGTTCTAATAGCCCAACCTCTATAGTCCCTGGAGATACCAAGTCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAAGGAATTTTCATAATTTAAACAGGTGAAGGAGAGTTAAATTGCTGGGAAGTGTAAAAAGTGTTAGGAATTTTAATTCTTGTATCATTAATGCATGCACAGAATCAGGAAAAGGTCTCACTACTAGATTTGCAAAAATGTAATGACATTATTATAATTGTGTATTATCTTTGTATCATTCTCTTTGCCTATTATCATTGTCAATCCTTTAGAAATCTTCATTGGTGTAGGGATCTCCAGGTTTTATTCAGCACTGCCC 2733 0.4164 MKFMKLGSKPDALQTDGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNRLQKLLSKINDENSDEIQLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIERGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPASITWSYTYNRKLAELDKIVEDKITQQEKIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCHNGIGCSCSFLLKLLKVAILVEADESSRVQLMKGIGLKLHEASVKDLLIPARFPQNTKYDVDLVRDLLNLYMTNIKGSHDVAVEEKKDKANDESVLGHRFLLKVGNLVDGYLGEIAHDPNLSLSSFVDLSLSIPEFARSNHDGLYRAIDIYLKEHPSLTKAERKKLCGLMDVKKFTVDASTHAAQNERLPLRVVVQVLYFEQVRAATNARALSNSPRNPSNALADGDEECEKSGGESCQSLNSQMCHMKIRDEECHKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWNVGKGQGENRSSETSGSSNSPTSIVPGDTKSSGSSLRHRRHSIS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00346 616 MobiDBLite consensus disorder prediction 495 522 - -
Pste8g00346 616 PANTHER OS12G0117600 PROTEIN 25 568 IPR043454 -
Pste8g00346 616 CDD BTB_POZ_NPY3-like 21 124 - -
Pste8g00346 616 MobiDBLite consensus disorder prediction 541 616 - -
Pste8g00346 616 SUPERFAMILY POZ domain 22 114 IPR011333 -
Pste8g00346 616 Pfam NPH3 family 211 464 IPR027356 -
Pste8g00346 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Pste8g00346 616 MobiDBLite consensus disorder prediction 577 604 - -
Pste8g00346 616 Pfam BTB/POZ domain 26 115 IPR000210 GO:0005515
Pste8g00346 616 Gene3D Potassium Channel Kv1.1; Chain A 8 118 IPR011333 -
Pste8g00346 616 SMART BTB_4 29 127 IPR000210 GO:0005515
Pste8g00346 616 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00346 Pste-Chr8 1847641 1852693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00346 22 491 EF-hand Containing Proteins AT3G44820 35.412 6.06e-94 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00346 8 1847641 1852693 Pste8g00346 8 1847641 1852693 ECH
Pste8g00346 8 1847641 1852693 Pste2g01526 2 16370189 16374561 PCT