Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01526 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGCTGATGGAAACTGTATAAGGTATGTGTCGTCTGAATTGACTACAGATGTAACCGTTAATGTGGGTGATGTTAAGTTTTACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGCCTACAAAAATTGGTATCAAAGGCCAATGAAAGGAATTCTGATGATATTTACTTGGATGATTTCCCTGGAGGGCCAAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCAGCTGAATACCTTGAGATGACTGAGGATGTTGATAGAGGAAACTTGGTTTTAAAGATTGAGGTGTTTCTAAACTCTAGTATCTTCCGTTGCTGGAAGGATTCTATAATTGTTCTCCAAACTTCTAAATCTCTTCTGCCATGGTCAGAGGATCTGAAGATCATTGGAAGATGCATAGATTCCATAGCTTCTAAAACTAGTGTGGACCCAGCATACATCACTTGGTCTTACACTTACAATAGGAAATTAACTGAACCTGATAAAATTGCTGAGGACAAGATGACATTTCTAGAGAAAATTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAGCGAGTAATGGTTTCTGTGAAATCAAAGGGAAGAATGGATGGTTTTGTGATTGGGGAGGCACTAAAAACCTATGCATTAAGATGGATACCTGATTCTGTTGATACATTGGTTTCAGATGCCAACAGCTTAAGGACTAAATCCGTGGTAGAAACAATTGTCTGTTTATTGCCATATGATAATGGCATTGGTTGTTCGTGTAGTTTCTTGCTCAAGTTATTGAGAGTGGCCATATTAGTTGAAGCAAATGAGTCATCAAGAGAAGAATTGATGAAGAGCATTAGCCTCAAATTGCATGAAGTTTGTGTCTCAGATTTATTGATTCCAGCAAGGTCTACCCAGATTACCACATATGATGTTCATTTGGTACAAGGTCTTTTGAATCGATACATGAATCATGAAAAGGGAAGCTGTGGTATGGAGGTTGTCGAGGAGAAAGATAGAGAAGATAAATATATTTTAGCACGAAGGTCCTTATTGAATGTTGCCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTCAGTCTCTCTAGTTTTGTCGATTTATCACAATCACTTCCAGATTTTGCTAGACCAGATCACGATGGTCTGTACAGAGCTATTGACATCTACTTGAAGCAACACCAAGATTTGACAAAAGCTGAAAGGAAGAAGCTATGTGGAATAATGGATGTCAGGAAATTGACAGGGGATGCTTCTATGCATGCTGCACAGAATGAAGGGCTTCCTCTTAGAGTTGTAGTGCAGGTTCTCTTCTTTGATCAGGTCAGGTCTTCTATCAGCTTTCAGACACTCGGTAACAATAGCGCACGTGACCCTTTATGTTCTCCAATGAACCAAGATGAAGGATGTGAGAAAACAGCAGGAGATAGCTGCCAAGCTCTCAAGAACCGGATGAGTCATCTGAGGATCAAGGATGAAGATTTACAAAAAAATAGGAAGTTGGGTAAGAAGAATAGCAAAAACAGCAAAAGTGGCACTCAGTTGCTATCATCACGGTCAAGGAGAATCTTTGACAAGTTATGGAGTGTGAGAAAAGTACAAAGAGGGAATAGGAGTTCAGAGACTTCAGGGAGTTCTAGTAGCCCAACTTCTCTAGGCCACGGAGATACCAAATCATATGGCCTATCTTTGAGACACCAGAGACATTCTATCTCTTAGGGAGTCAGTAGAGATTATTTGGAACAGGTGAGGAACATTCAAATTGCTGTGTAATGTAAAGTGGTAGAATGATATGTTGTTATATTTGCATTTGCAGTTGCAGTGCGTGCACAGAATGAGGAAAAAGGTTCGTCAGCATTGCATCAAAATGTAATATAGTTTATCTTTCTCTCATGTGTAAGACCTTCCATGTTCCATCCTACACTATGTTTGCTTGTTAG 2078 0.3965 MKFMKLGSKPDALQADADGNCIRYVSSELTTDVTVNVGDVKFYLHKFPLLSKSNRLQKLVSKANERNSDDIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRCWKDSIIVLQTSKSLLPWSEDLKIIGRCIDSIASKTSVDPAYITWSYTYNRKLTEPDKIAEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVSVKSKGRMDGFVIGEALKTYALRWIPDSVDTLVSDANSLRTKSVVETIVCLLPYDNGIGCSCSFLLKLLRVAILVEANESSREELMKSISLKLHEVCVSDLLIPARSTQITTYDVHLVQGLLNRYMNHEKGSCGMEVVEEKDREDKYILARRSLLNVAKLVDGYLGEIAHDPNLSLSSFVDLSQSLPDFARPDHDGLYRAIDIYLKQHQDLTKAERKKLCGIMDVRKLTGDASMHAAQNEGLPLRVVVQVLFFDQVRSSISFQTLGNNSARDPLCSPMNQDEGCEKTAGDSCQALKNRMSHLRIKDEDLQKNRKLGKKNSKNSKSGTQLLSSRSRRIFDKLWSVRKVQRGNRSSETSGSSSSPTSLGHGDTKSYGLSLRHQRHSIS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01526 618 CDD BTB_POZ_NPY3-like 23 126 - -
Pste2g01526 618 Coils Coil 524 544 - -
Pste2g01526 618 PANTHER OS12G0117600 PROTEIN 26 566 IPR043454 -
Pste2g01526 618 SMART BTB_4 31 129 IPR000210 GO:0005515
Pste2g01526 618 SUPERFAMILY POZ domain 24 118 IPR011333 -
Pste2g01526 618 ProSiteProfiles NPH3 domain profile. 213 489 IPR027356 -
Pste2g01526 618 Gene3D Potassium Channel Kv1.1; Chain A 15 127 IPR011333 -
Pste2g01526 618 MobiDBLite consensus disorder prediction 535 562 - -
Pste2g01526 618 ProSiteProfiles BTB domain profile. 31 99 IPR000210 GO:0005515
Pste2g01526 618 Pfam BTB/POZ domain 27 117 IPR000210 GO:0005515
Pste2g01526 618 MobiDBLite consensus disorder prediction 580 603 - -
Pste2g01526 618 Pfam NPH3 family 213 465 IPR027356 -
Pste2g01526 618 MobiDBLite consensus disorder prediction 580 618 - -
Pste2g01526 618 FunFam BTB/POZ domain-containing protein NPY2 19 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01526 Pste-Chr2 16370189 16374561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01526 24 488 EF-hand Containing Proteins AT3G44820 34.077 2.75e-88 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00346 8 1847641 1852693 Pste2g01526 2 16370189 16374561 PCT