Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02391 ATGGCTAGTTTTACTGTTGGAAAGAAGAGATTTATCCAGCCAAATATGTGTTTCAACAATTTGATCAATCAAGATAAATCAACTCTTTTACAAAGCAATCATAATTTTTTCCCTGAGGCATTAAATGAGGATTATAGCCCCATTCTACCTGGACTGCCTGATGATGTGGCAGAGTATTGTCTTGCTCTTGTGCCTCGTTCCAACTTCCCTGCTTTGGGTTGGGTCTGTAAGAGATGGAGGTCGTTTATTCAAAGCAAAGAATTCGCTACTGTGCGTAAACTGACTGGGATGCTTGAGGAATGGCTCTATTTCCTAACAACAGATTGTGAAGGAAAGGAAAGTCATTGGGAGGTTATGGATTGTTTCGGTCATAAATGCCGGTCTCTTCCACCAATGCCTAGTCTAGGAAAGGCTGGGTTCGGAGTGGCGGTTCTTAATGGAAAGCTTCTTGTCATGGCTGGTTATTCAGCTATTGAAGGAACTGTCTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTGCTTCAACAGCTGGAGCAGATTGTCAGACATGAATGTGGCTCGTTATGACTTCGCCTGTGCTGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGCTATGGGGTGAATGGGGACAGTCTTTCCAGTGCTGAAGTGTATGATCCAGATACTGACAAGTGGACACTAATAGAGAGCCTTCGTCGCCCTAGATGGGGTTGCTTTGCTTGTGGATTTGAGGGGAAGCTCTATGTTATGGGTGGAAGGTCAAGCTTTACTATTGGAAACTCCAAGTTTGTTGATATATATAACCCTGAGAGACACAGCTGGTGTGAGATTAAGAATGGTTGTGTTATGGTTACAGCTCATGCAGTATTAGGAAAGAAGTTGTTCTGTATGGAGTGGAAGAACCAACGGAAGCTAGCTATTTTCAGTCCAGAGGATAATTCATGGAAAATGGTACCGGTTCCATTGACAGGGAGCTCAAGTGTTGGCTTTCGATTTGGGATACTGGATGGGAAGTTGCTGCTATTCCCTCTGGAAGCTGAACCCGTTTATCAAACATTGTTGTATGATCCAAATGCAGCTCTGGGGTCAGAGTGGCAAACTTGTGACATAAGGCCATCTGGTTTGTTCTTGTGTTGTGTAACAATTAAAGCATGAAACATTGTCTATGGAGTTAGGGATACATTTATTGAGTTTTCTGCATTTTACTAAGATTCAAGACAGCACTGAGCGTGAGTGTTACTCACGTTATATTATATTATTATCTGATTTTAATCTTATGCTTTTGCTTGTTTTGTGTAACTGGACTGTGAGGGATTATTGGTATTGCAATTATGGACTTTGAGCA 1348 0.4199 MASFTVGKKRFIQPNMCFNNLINQDKSTLLQSNHNFFPEALNEDYSPILPGLPDDVAEYCLALVPRSNFPALGWVCKRWRSFIQSKEFATVRKLTGMLEEWLYFLTTDCEGKESHWEVMDCFGHKCRSLPPMPSLGKAGFGVAVLNGKLLVMAGYSAIEGTVFASAEVYQYDSCFNSWSRLSDMNVARYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDPDTDKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHSWCEIKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSVGFRFGILDGKLLLFPLEAEPVYQTLLYDPNAALGSEWQTCDIRPSGLFLCCVTIKA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02391 385 PANTHER OS02G0202900 PROTEIN 8 381 IPR045887 -
Pste7g02391 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Pste7g02391 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
Pste7g02391 385 SUPERFAMILY Kelch motif 99 343 IPR015915 GO:0005515
Pste7g02391 385 SUPERFAMILY F-box domain 45 89 IPR036047 GO:0005515
Pste7g02391 385 Gene3D - 86 382 IPR015915 GO:0005515
Pste7g02391 385 Pfam F-box domain 51 88 IPR001810 GO:0005515
Pste7g02391 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Pste7g02391 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Pste7g02391 385 SMART kelc_smart 247 293 IPR006652 GO:0005515
Pste7g02391 385 Pfam Kelch motif 236 279 IPR011498 GO:0005515
Pste7g02391 385 CDD F-box_AtAFR-like 48 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02391 Pste-Chr7 22681045 22682620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02391 52 230 Miscellaneous Gene Families AT4G33900 29.442 2.01e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02391 7 22681045 22682620 Pste3g02733 3 20143553 20145553 PCT