Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02733 ATGCCTGGTTTTGTGGCTGAAAATAAGAGATTCACAGAGCCAAGTATGTGTTTTCCCAATTTGGCCAACCTTGATAAACCAACTCTTACAAAAAGCAATCATTGTGTGAGGTCTGAGGCTCTGTATGATGATGATGGTCCCATCTTACCTGGTCTGCCTGATGATGTTTCAAAGCACTGTCTTGCACTTGTGCCTCGTACAAACTTCCCAGCCATGGGTGGTGTCTGTAAGAGATGGAGGTGCTTTATTCAAAGCAAAGAATTTATAACTGTGCGAAAATTGGCTGGGATGCATGAGGAATGGCTCTATATCTTAACAGCAGGTAGTGAAGAAGGGAGCCGCTGGGAGGTTATGGATTGTCTCGGTCATAATCGTCGATCTCTTCCACCAATGCCTGGTCCAGTAAAGGCTGGCTTTGGGGTAGTGGTTCTTAATGGAAAGCTTCTTGTTATGGCTGGTTATTCATCAATTGATGGAACTGCTTCGGTCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAATAGCTGGAGCAGATTGTCAGACATGAATGTGGCTCGGTATGACTTTGCTTGTGCTGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGCTATGGTGCAACCGGTGACAGTCTCTCCAGTGCAGAGATGTACGATCTGGATACCAACAAGTGGACGCCGATAGAGAGTCTTCGTAGGCCGAGATGGGGTTGCTTTGCTTGTGGTTTTGAGGGAAAGCTCTATGTCATGGGTGGAAGGTCTAGCTTCACAATTGGAAATTCCAAGTTTGTTGATGTTTACAACCCTGAGAAGCAAGGGTGGTGTGAGATGAAAAATGGGTGTGTGATGGTCACTGCTCATGCAGTGTTGGGAAAGAAGTTGTTCTGTATGGAGTGGAAGCACCAGAGGAAGTTAGCAATATTCAATCCAGAGGATAATTCATGGAAAATGGTACCTGTCCCTTTGACAGGGAGTTCCAGCATTGGTTTTCGGTTTGGGATATTGGACGGTAAGTTGTTGCTCTTCTCACTAGAGGAAGAGCCTTCATATAGGACTCTGTTGTATGATCCAAATGCAACCCCAGGATCTGAGTGGCAGACTTCTGATGTAAGACCATCTGGTTTGTGCTTATGCAGTGTAACTATTAAGGCCTGAAAAGTTGGCTGCTTCTTAATTTAGAGAAACTCAAGAGAGCTATGCACCTTTGTTGCTTTACTAGGATTCTCAGACAGCCTTAATTTAGTGTTTTTGCTTGTTCCTGTTAGTTTTACTTGTCATGCCATGTCTCTGGTTTTTGGTGGATTATTTCTACAACTCTATTGATCCAGTAATAATCAACTTTGTGCAGCACTACTTCAAATTATGGTGGACTTTCTTTTTCTTT 1384 0.4371 MPGFVAENKRFTEPSMCFPNLANLDKPTLTKSNHCVRSEALYDDDGPILPGLPDDVSKHCLALVPRTNFPAMGGVCKRWRCFIQSKEFITVRKLAGMHEEWLYILTAGSEEGSRWEVMDCLGHNRRSLPPMPGPVKAGFGVVVLNGKLLVMAGYSSIDGTASVSAEVYQYDSCLNSWSRLSDMNVARYDFACAEVNGLVYAVGGYGATGDSLSSAEMYDLDTNKWTPIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKQGWCEMKNGCVMVTAHAVLGKKLFCMEWKHQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYRTLLYDPNATPGSEWQTSDVRPSGLCLCSVTIKA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02733 384 SMART kelc_smart 198 245 IPR006652 GO:0005515
Pste3g02733 384 SMART kelc_smart 147 197 IPR006652 GO:0005515
Pste3g02733 384 SMART kelc_smart 246 291 IPR006652 GO:0005515
Pste3g02733 384 Gene3D - 89 382 IPR015915 GO:0005515
Pste3g02733 384 Pfam Kelch motif 235 279 IPR011498 GO:0005515
Pste3g02733 384 SUPERFAMILY F-box domain 47 89 IPR036047 GO:0005515
Pste3g02733 384 Pfam Kelch motif 186 231 IPR006652 GO:0005515
Pste3g02733 384 Pfam Kelch motif 137 184 IPR006652 GO:0005515
Pste3g02733 384 SMART fbox_2 52 92 IPR001810 GO:0005515
Pste3g02733 384 PANTHER OS02G0202900 PROTEIN 11 380 IPR045887 -
Pste3g02733 384 Pfam F-box domain 51 88 IPR001810 GO:0005515
Pste3g02733 384 SUPERFAMILY Kelch motif 105 345 IPR015915 GO:0005515
Pste3g02733 384 CDD F-box_AtAFR-like 48 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02733 Pste-Chr3 20143553 20145553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02733 52 229 Miscellaneous Gene Families AT4G33900 28.497 1.46e-12 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02733 3 20143553 20145553 Pste3g02733 3 20143553 20145553 ECH
Pste7g02391 7 22681045 22682620 Pste3g02733 3 20143553 20145553 PCT