Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01884 GATTCTCCTGCTTCAACCCACTCTTGTGTTTATTTTTTGTTGATAAGATCTTAACCATCACAATGAGTTGACCGACAAGACTGTTATGTGTATTTATAAACTCGTAAAATTTTTATTATATTATTAAAATGTTTAATGTTTATAAACTTTTTTATTATTTTTATATAAAATAAATTCTTGCTTCTCTACGAGTTTCACAGATCTGTGTAGACTCTCAGATTTAATAACTTGTACTTATCCATTGTATGCTATGCACCATCAAATTTTTCATTCCTTACAATGAAGAACAACTTCAACACCATCATGTTGTGGACTCGTTCTCTAAGGCTTTTCAGATCAACTCGCATCTTCTCATCATATCATCATCATTCACGTAAATTTTGTAGCTTTTCCCAGAACAATGATCCGGGGTCGTGGGAATCAATGGAGGGTCTTCTTCGTTCCCCTGCAAATTTTGTTCCTTTGTCTCCTATAAGCTTCCTAGAGAGAGCAGCCAAGGTTTGCAGAGACCGAACCTCGCTTGTGTATGGTTCTTTGGAGTATAACTGGGGTGAAACATATCAACGGTGTTTGAAACTCGCTTCTGCTCTGACCCAAATGGGAATTTCACGCGGGGATGTGGTTGCCACACTATCTCCTAATGTCCCTGCAATGTATGAGTTACATTTTGCTGTCCCAATGGCTGGAGCCGTTCTTTGTACCCTTAACTCACGCCTAGATGCGGCCATGGTTTCAACCCTTTTGGAGCATTCACAAACGAAAGTCCTTTTTGTAGACTACCAACTACTTGAAATTGCACGGGGAGCATTGGACCTGCTAGGCAAAAAAACTACAAAATTGCCAATTTTGGTTCTAGTTACCGACTCTGATTTCCCATCCACCACTGACATTACATCAGTTAGTTATGAGTATGAGAGGCTTTTGGCTGATGGGCATAGTGGTTTTGATATAGTGAGACCAAATAGTGAATGGGATCCTATAAGTATAAATTACACCTCTGGCACCACATCTAGGCCTAAAGGAGTTGTCTACAGTTACAGGGGTGCTTATCTTAACTCTCTAGCAACTGTTCTACTCTTTAGAATGGACCTTTTTCCAGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAATGGGTGGTGCCTCCCTTGGGGAGTGGCATCACAATTTGGGGTCAATGTTTGTGTTAGGAAGGTCACTCCAAAGAACATTTTTGACAATGTGGCTAAGCATAAGGTGACACACATGGCAGGAGCACCAACTGTGCTGAACATGATTGTGAACTCTGCATTGACAGATCGAAAGCCACTCAATCATAAGGTGGTGGTGATGACAGGAGGTTCGCCTCCACCGCCACAGATCCTTGCCAGTATGGAGGAGTTTGGCTTTAACATCTCCCACCTGTATGGCCTCACAGAAACATATGGTCCAGGCACTTTCTGTGCATGGAGACCTGAGTGGGAGTGGTTGCAACATGAACAGAGATCAAAGATGAAAGCAAGGCAGGGGGTGCCTCATGTGGCTTTAGAGGAGATTGATGTGAAGGATCCTGTCACAATGGAAAGTGTTCCATCTGATGGCACAACAATTGGGGAGGTCATGTTTAGAGGAAACACAGTGATGAGTGGATATTTAAGAGATTTGAAAGCAACAGAAGAAGCTTTCAAAGATGGATGGTTTCATAGTGGGGATCTAGCTGTGAAACACTCTGATGGTTACATAGAAATCAAGGACAGATTGAAGGATATCATAGTTTCTGGGGGAGAGAATATTAGCTCAGTTGAGGTAGAAACGGTTTTGTATAGCAATCCAGCAGTTTTTGAAGCTGCAGTTGTTGCCAGACCTGATGATCATTGGGGCCAAACTCCTTGCGCGTTTGTGAAGTTGAAAGACGGGTTTGATGTAAATTCTCAAGAAATAATCAAATTTTGTAGGGACCGTTTGCCACATTACATGGCTCCTAAAACAGTCATTTTTCAAGATATGCCAAAAACTTCAACAGGGAAGATACAGAAGTATGTTCTGAGGGAGAAAGCCAAGGCTTTGGGCAGCATTTCTGAATCCAAGGGTGTAATAAATTGTAGTTGATTTCTCAAATAGGAAAGAGGTTGTACAAGAAACTCCATTTTTATTGCAAGAAATATGTAACAGATGAATGTAATTTTCACGAGTCCCATTTTATTGCCGAAACTAAAAATTTCCTTGTACATCATAGCCTTGAGCAAGAAATATATAACAGATGAATGTAATTTTCACATGAGTCCC 2265 0.4079 MKNNFNTIMLWTRSLRLFRSTRIFSSYHHHSRKFCSFSQNNDPGSWESMEGLLRSPANFVPLSPISFLERAAKVCRDRTSLVYGSLEYNWGETYQRCLKLASALTQMGISRGDVVATLSPNVPAMYELHFAVPMAGAVLCTLNSRLDAAMVSTLLEHSQTKVLFVDYQLLEIARGALDLLGKKTTKLPILVLVTDSDFPSTTDITSVSYEYERLLADGHSGFDIVRPNSEWDPISINYTSGTTSRPKGVVYSYRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGVNVCVRKVTPKNIFDNVAKHKVTHMAGAPTVLNMIVNSALTDRKPLNHKVVVMTGGSPPPPQILASMEEFGFNISHLYGLTETYGPGTFCAWRPEWEWLQHEQRSKMKARQGVPHVALEEIDVKDPVTMESVPSDGTTIGEVMFRGNTVMSGYLRDLKATEEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSVEVETVLYSNPAVFEAAVVARPDDHWGQTPCAFVKLKDGFDVNSQEIIKFCRDRLPHYMAPKTVIFQDMPKTSTGKIQKYVLREKAKALGSISESKGVINCS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01884 602 PANTHER ACYL-ACTIVATING ENZYME 50 593 - -
Pste7g01884 602 Gene3D - 53 487 IPR042099 -
Pste7g01884 602 CDD ttLC_FACS_AEE21_like 59 584 - -
Pste7g01884 602 Gene3D - 488 590 IPR045851 -
Pste7g01884 602 ProSitePatterns Putative AMP-binding domain signature. 236 247 IPR020845 -
Pste7g01884 602 SUPERFAMILY Acetyl-CoA synthetase-like 46 587 - -
Pste7g01884 602 FunFam Long-chain-fatty-acid--CoA ligase FadD 50 488 - -
Pste7g01884 602 FunFam 2,3-dihydroxybenzoate-AMP ligase 488 590 - -
Pste7g01884 602 Pfam AMP-binding enzyme 69 493 IPR000873 -
Pste7g01884 602 Pfam AMP-binding enzyme C-terminal domain 502 576 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01884 Pste-Chr7 17234756 17237837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01884 125 594 Miscellaneous Gene Families AT1G20560 62.316 0.0 643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01884 7 17234756 17237837 Pste7g01884 7 17234756 17237837 ECH
Pste1g03293 1 15081094 15090985 Pste7g01884 7 17234756 17237837 PCT