Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03293 ATGGACACGGCACCATTGTCACCCTCACCCTTGAGTTTCCTAGAAGCAGCAGCCACTACCTATGGTGATCACGTCTCCATCATCTACAATCACAATGTCAGATTCTCTTGGAGCCAAACCTATCAAAGATGCGTAAATCTTGCTTCCACTCTCGTTAACTTGGGGATTTCTCGCAACGATATTGTTGCAGCATTGGCTCCAAATATTCCAGCATTATACGAGCTTCATTTTGGGGTTCCGATGGCAGGGGGTGTTCTTTGTGCACTTAATACCCAATTAGATGCAACAACATTGACTCTAATATTGGAACAAATAGAGCCATGCAAAATCATGTTCGTGGACTACCAATTAATTGATTCTGCTCTGAAAGCATGTGAAATTCTATCCCAGAGAAAATGCAAGGCACCCCTCATCGTCCTAATACCACATTATGACCAAGAAGCATCTTTCTTAGTGAAGGATGTCCCACCAGGTACCTTGAACTATAATGAACTAATTGCAATTGGACAAAAAGATTTTGAGACTTTAAAACCAAGCAATGAACGTAATCCCATATCAGTGAATTACACATCAGGCTCCACGGGGATTCTTCCAAAAGGAGCTGTTTATAGCCACAGAGGTGCCTATCTTAATTCACTTGCAGCAATTGCTCGTTTTGAGATGAAACGAATGCCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAACGGATGGTGCTTCACATGGGGAATGGCTGCTATTGGTGGCACCAATATTTGCATGAGGAATGTCTCAGCAAAAGCCATATTTGATGCAATTCACCTTTATAAAGTGACTCATTTTTGTGGTGCACCTACCCTTTTGGACATGATTGCATATGCATCACATAGTGACCAAATGCCTCTGTCTCATAGAGTTAATGTCACGGTTGCCGGTGTGCTACCTCCATTTCATGTTCTTAACAAGGTGTCACAACTTGGATTTGATGTGAACATTGGATACGGTATGACAGAGACTTTAGGGCCTGTCATTGTAAGACCATGGAATCCCAATTTAGATGGTGAACATACAAAGCTAAATTATGGTGTTTTAGAGTTTATGCAAGATGTTGATGTGAAAGATCCAGAGACTTTTGAAAGTACTCCTCGTGATGGGAAAACCATAGGTGAAATTATGTTCAAAGGGAATGCTTTGATGTTGGGGTACCTTAAGAATTCACAAGCAACGGGAAAGGCTTTAAAGGGTGGATGGTATAGAACTGGGGACCTTGGTGTTAGGGAACCAAATGGTTCTATTACAATGAAGGATAGAGCAAAGGATATTATCTATTGTAAAGGAAAGCTTGTGAGCTCACTAGAGGTGGAAGCAGTGTTGTTGAATCATCCAAAGGTTTTAAAAGCAGCTGTTGTGGGGATAGATGATGAATGCTTGGAGGAATCACCATATGCAATTGTCAAATTAAAGGATGGATATAGTGCCACAGTTGAAGATATCATCAAGTTTTGTGAAGATCATTTGGCTACTCACATGGTTCCTAGGAGTGTGGAATTTGGAGATTTGCCTGTTAATTCAACTGGGAAGGTACAAAAATTTCGTATCAGGGAGAAGATCAAAAGCAATGAATGGTATAACTCAATGAACTAG 1626 0.4096 MDTAPLSPSPLSFLEAAATTYGDHVSIIYNHNVRFSWSQTYQRCVNLASTLVNLGISRNDIVAALAPNIPALYELHFGVPMAGGVLCALNTQLDATTLTLILEQIEPCKIMFVDYQLIDSALKACEILSQRKCKAPLIVLIPHYDQEASFLVKDVPPGTLNYNELIAIGQKDFETLKPSNERNPISVNYTSGSTGILPKGAVYSHRGAYLNSLAAIARFEMKRMPVFLWTVDMFRCNGWCFTWGMAAIGGTNICMRNVSAKAIFDAIHLYKVTHFCGAPTLLDMIAYASHSDQMPLSHRVNVTVAGVLPPFHVLNKVSQLGFDVNIGYGMTETLGPVIVRPWNPNLDGEHTKLNYGVLEFMQDVDVKDPETFESTPRDGKTIGEIMFKGNALMLGYLKNSQATGKALKGGWYRTGDLGVREPNGSITMKDRAKDIIYCKGKLVSSLEVEAVLLNHPKVLKAAVVGIDDECLEESPYAIVKLKDGYSATVEDIIKFCEDHLATHMVPRSVEFGDLPVNSTGKVQKFRIREKIKSNEWYNSMN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03293 541 CDD ttLC_FACS_AEE21_like 4 529 - -
Pste1g03293 541 Gene3D - 433 535 IPR045851 -
Pste1g03293 541 Pfam AMP-binding enzyme 15 437 IPR000873 -
Pste1g03293 541 Gene3D - 4 432 IPR042099 -
Pste1g03293 541 PANTHER ACYL-ACTIVATING ENZYME 8 533 - -
Pste1g03293 541 SUPERFAMILY Acetyl-CoA synthetase-like 10 533 - -
Pste1g03293 541 Pfam AMP-binding enzyme C-terminal domain 447 521 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03293 Pste-Chr1 15081094 15090985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03293 72 533 Miscellaneous Gene Families AT1G20560 49.680 2.18e-158 458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03293 1 15081094 15090985 Pste1g03293 1 15081094 15090985 ECH
Pste1g03293 1 15081094 15090985 Pste7g01884 7 17234756 17237837 PCT