Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01865 ATGAAATTGTGTTGTTGGATTGTGTGCTTGTTAGTGGCAATATTGAAGGATGGGGCCACAGCACAGCAATGTGGTAGACAAGCTGGTGGAGCATTGTGCCAGAATAGGTTATGCTGCAGCCAACATGGGTGGTGTGGTAGCACAAACGAGTATTGTGGAACAGGTTGCCAGAGCCAATGTACAAGTACTGCTGGAGATATTAGCAGCATCATTAGTCGTGCTCAATTTGAAGAAATGCTTAAACACCGAAACGATGCAGCGTGTCCAGGGCGTGGATTCTACACCTATGATGCTTTTCTTGCTGCTGCTCGCTCTTTCCCTGCCTTTGGCAACACCGGTGATGAAACCACCCGCAAGAGGGAGGTTGCTGCTTTCTTTGCCCAAACTTCTCACGAAACCACAGGTGTTTATTGTAGTGGAGGGCAATGGCCATGTGCTCCTGGTAAAAGATATTATGGACGTGGTCCAATACAACTAACACACAACTACAATTATGGGCTAGCTGGAAGTGAACTTGGTGTAGATTTGACGAATAATCCGGATCTAGTAGCTGCAGACCCGGTTATGGCATTCAAGACAGCCATATGGTTTTGGATGAGGCCACAGGGTAACAAGCCATCATGCCATAATGTCATTGTTGGAGCATGGAATCCTTCTAGTGCTGACCAGCAAGCGGGTCGGGTCCGCGGATTCGGTGTCATCACCAACATCATCAACGGTGGACTCGAATGCGGACGCGGCCCGGATTCTCGGGTTCAAAATCGGATCGGCTTCTACCAAAGATACTGTGGAATGTATGGAATAAGCCCCGGGAACAACTTGGATTGCTACAATCAGATGCCGTTTTAATTGCTTGAGGAAATTAATTAATACTCATCGTCCATATATATATCCTCTTCTTATTATAAGTGATCTGCAACCATTAATCCCACTTATAAAAGGGCACCTCAC 951 0.4658 MKLCCWIVCLLVAILKDGATAQQCGRQAGGALCQNRLCCSQHGWCGSTNEYCGTGCQSQCTSTAGDISSIISRAQFEEMLKHRNDAACPGRGFYTYDAFLAAARSFPAFGNTGDETTRKREVAAFFAQTSHETTGVYCSGGQWPCAPGKRYYGRGPIQLTHNYNYGLAGSELGVDLTNNPDLVAADPVMAFKTAIWFWMRPQGNKPSCHNVIVGAWNPSSADQQAGRVRGFGVITNIINGGLECGRGPDSRVQNRIGFYQRYCGMYGISPGNNLDCYNQMPF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01865 282 Pfam Chitinase class I 137 276 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pste7g01865 282 Gene3D Endochitinase, domain 2 138 185 - -
Pste7g01865 282 Gene3D - 186 282 - -
Pste7g01865 282 SUPERFAMILY Plant lectins/antimicrobial peptides 23 63 IPR036861 GO:0008061
Pste7g01865 282 SUPERFAMILY Lysozyme-like 66 282 IPR023346 -
Pste7g01865 282 SMART ChitinBD_3 23 60 IPR001002 GO:0008061
Pste7g01865 282 PRINTS Chitin-binding domain signature 31 39 IPR001002 GO:0008061
Pste7g01865 282 PRINTS Chitin-binding domain signature 39 46 IPR001002 GO:0008061
Pste7g01865 282 PRINTS Chitin-binding domain signature 46 53 IPR001002 GO:0008061
Pste7g01865 282 CDD chitinase_GH19 71 276 - -
Pste7g01865 282 ProSitePatterns Chitinases family 19 signature 1. 88 110 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pste7g01865 282 Gene3D - 21 62 IPR036861 GO:0008061
Pste7g01865 282 ProSitePatterns Chitinases family 19 signature 2. 189 199 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pste7g01865 282 FunFam Basic endochitinase 21 62 - -
Pste7g01865 282 PIRSF Endochitinase 1 282 IPR016283 GO:0004568|GO:0005975
Pste7g01865 282 ProSitePatterns Chitin recognition or binding domain signature. 33 52 IPR018371 GO:0008061
Pste7g01865 282 PANTHER CHITINASE-RELATED 7 279 - -
Pste7g01865 282 FunFam Endochitinase (Chitinase) 128 185 - -
Pste7g01865 282 Gene3D - 70 136 - -
Pste7g01865 282 CDD ChtBD1_GH19_hevein 22 60 - -
Pste7g01865 282 ProSiteProfiles Chitin-binding type-1 domain profile. 21 62 IPR001002 GO:0008061
Pste7g01865 282 Pfam Chitin recognition protein 23 60 IPR001002 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01865 Pste-Chr7 17118816 17120204 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01865 21 282 Glycoside Hydrolase AT3G12500 63.605 1.16e-128 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01865 7 17118816 17120204 Pste7g01865 7 17118816 17120204 ECH
Pste1g03288 1 15042991 15045169 Pste7g01865 7 17118816 17120204 PCT