Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01548 ATGATAATAATAACACACACTTATATATAATATATGTGCATGCGTTACGTTCATGTGTTTGCATGCAAAGGCTATGCACGTTGCATTTTGTGTCTAATCGATTATAACTGATTATTGTGCTTGCATGCAGGGCATTTGGGAGTGCTACGTTTTTTTTTTTCTGCTATCGTATGATGAGTAAATATTTCTCCTGAATACCCAGCAGAAGCTATCAACAATAGCCACACCATGTCTGGACCCCCATCTCCAAAGACATCTCTTGATAAGAGTGACCGTGTTGGTTCGTTGACAAAGAGGCTGAGGAATTCCCTGACAAGGAGTAAGAGGAGAAGCAGCAGCAAGGTCATGTCGGTTGAAATCGAGGATATCCGCGATGCTGAAGAGTCCAAAGCTGTTGATGAGTTCCGTCAAGCTCTTGTCTTGGACGAGCTACTCCCTGAGAAGCACGATGATTATCACATGCTGCTCAGGTTCCTTAGGGCCAGGAAATTTGACCTTGAGAAATCTAAGCAAATGTGGTCTGACATGCTTCAATGGAGGAAGGAATTTGGTGCTGATACCATTATTGAGGATTTTGACTTCAAGGAACTAGATGAAGTCTTGCAATATTATCCTCAAGGACATCACGGAGTTGATAAAGATGGACGACCAGTGTACATTGAGAGATTGGGCCAAGTTGATGCCACCAAGTTGATGCAAGTCACAACCATGGATCGTTATATCAAAAACCACGTTAAGGAGTTTGAGAGGACATTTGATGTGAAATTCCCTGCTTGCTCCATTGCTGCAAAGAAAAACATCAATCAAAGCACAACCATCCTTGATGTGCAAGGAGTGGGCCTTAAGAACTTCAACAAGCATGCCAGGGAGCTCATCACACGCCTTCAAAAGATTGACGGTGACAACTACCCTGAAACCTTGAACCGCATGTTCATCATCAATGCTGGTTCTGGATTCAGAATGTTGTGGAACACTGTTAAATCCTTCCTTGACCCAAAGACCACAGCAAAAATCCATGTTCTTGGCAACAAGTATCAAAGCAAATTGCTTGAAATGATTGATGAAAGTGAGTTGCCAGAGTTTTTGGGAGGGGCTTGTACCTGTGCTGAGCATGGAGGCTGCATGCGCTCTGATAAGGGCCCTTGGAAGGATGCTGAAATAATGAGGATGGTTCAAAACGGTGAGCACAAATGTTCAAGGAAATGTGAGGTTCCTGTCGTGGAAGAGAAAACTTCTGAGGAACCCGAGACTCCAAAGATGGAGGAAAAACTTGTCGCACAATTGTCTTCTGTCTTTGCTGAGGTGCCTGCTGCCAAGGCTTACAACTACGAGGACTTTGTCCCCGACGCTGAGAAAACTGCTTGGAACAAAAAGATGGAAGAAAATCAGAAATTTGCAGTATCAAAAGCTGGAGTAGATGCATACGCCATGGTTGATTCCTTCAAGATTCACGAAAAAGTGAACTCTCAAATCTTCACTGGCGTGATGGCCTTTGTGATGGGCATAGTGACCATGGTGAGGATGACCAGGAACATGCCAAAGAAGCTCACAGACGCCAACTTCTACTCCAACTTGGGTGGTGAATACAAAGGACAGGGCCCTAACTCTGACCAAATGACCATGCCTGTCATCTCTGCTCAAGAGTTCATGACTGTGATGAAGCGCATGGCTGAGTTGGAAGAGAAAATGGTCAACATGAACAACCTAACCATCTGCATGCCACCTGAGAAGGAGGAAATGCTCAATGCTGCTATTTCACGTGCAGATGCTTTGGAGCAAGAACTCATGGCCACCAAAAAGGCTTTGGAGGACTCACTTGCTAAGCAAGAGGAGCTTTCCATTTACGTCGAGAAAAAGAAGAAGAAGAAGAAGTTGTTCGCCGTTTGGTAAACTCTCAATTTACATGAGGTTTGATTCTACATTCAGCTTTCCC 1933 0.4418 MSGPPSPKTSLDKSDRVGSLTKRLRNSLTRSKRRSSSKVMSVEIEDIRDAEESKAVDEFRQALVLDELLPEKHDDYHMLLRFLRARKFDLEKSKQMWSDMLQWRKEFGADTIIEDFDFKELDEVLQYYPQGHHGVDKDGRPVYIERLGQVDATKLMQVTTMDRYIKNHVKEFERTFDVKFPACSIAAKKNINQSTTILDVQGVGLKNFNKHARELITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEMIDESELPEFLGGACTCAEHGGCMRSDKGPWKDAEIMRMVQNGEHKCSRKCEVPVVEEKTSEEPETPKMEEKLVAQLSSVFAEVPAAKAYNYEDFVPDAEKTAWNKKMEENQKFAVSKAGVDAYAMVDSFKIHEKVNSQIFTGVMAFVMGIVTMVRMTRNMPKKLTDANFYSNLGGEYKGQGPNSDQMTMPVISAQEFMTVMKRMAELEEKMVNMNNLTICMPPEKEEMLNAAISRADALEQELMATKKALEDSLAKQEELSIYVEKKKKKKKLFAVW 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01548 553 Gene3D - 26 107 - -
Pste7g01548 553 Coils Coil 505 536 - -
Pste7g01548 553 Gene3D - 108 319 IPR036865 -
Pste7g01548 553 Pfam CRAL/TRIO domain 126 288 IPR001251 -
Pste7g01548 553 Pfam CRAL/TRIO, N-terminal domain 71 99 IPR011074 -
Pste7g01548 553 SMART sec14_4 120 291 IPR001251 -
Pste7g01548 553 FunFam SEC14 cytosolic factor 108 320 - -
Pste7g01548 553 CDD SEC14 121 288 IPR001251 -
Pste7g01548 553 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 13 544 - -
Pste7g01548 553 SUPERFAMILY CRAL/TRIO domain 120 316 IPR036865 -
Pste7g01548 553 MobiDBLite consensus disorder prediction 1 36 - -
Pste7g01548 553 SMART CRAL_TRIO_N_2 75 100 IPR011074 -
Pste7g01548 553 PRINTS Cellular retinaldehyde-binding protein signature 247 266 - -
Pste7g01548 553 PRINTS Cellular retinaldehyde-binding protein signature 78 100 - -
Pste7g01548 553 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 120 294 IPR001251 -
Pste7g01548 553 SUPERFAMILY CRAL/TRIO N-terminal domain 49 116 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01548 Pste-Chr7 14201666 14205971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01548 54 285 Acyl Lipid Metabolism Gene Families AT5G47730 27.801 7.93e-21 92.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01548 7 14201666 14205971 Pste7g01548 7 14201666 14205971 ECH
Pste1g01763 1 5405559 5408884 Pste7g01548 7 14201666 14205971 ECH