Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01763 CAAGAGATAGAATATTCAGAGGATGATAAGAAAACAAAGCTTGGCTCGTTTAAAAAGGTAGCAATCAGTGCGTCCTCAAAGTTCAAGCACTCCTTGCAAAAGAAGGGGAGAAGGCATAGCAGGGTTATGTCTGTTGCTATTGAAGATGATGTTGATGCAGAAGAGTTGCAAGCAATTGATGCTCTTCGTCAAGCACTAATCTTGGAAGAGTTATTACCCTCAAAACATGATGATCATCATATGATGTTAAGATTCTTGAAAGCAAGGAAATATGACATTGAGAAAACAAAACAAATGTGGGCAGATATGCTTCAGTGGAGGAGAGAGTTTGGTGCTGACACCATCATGGAGGATTTTGAATTCAAGGAGAAGGATGAAGTTCTAAAATACTACCCACAAGGGAATCATGGAGTTGATAAGGAAGGTCGACCTGTTTATATTGAAAGGTTGGGTCAGGTAGACTCTAACAAGCTGATGCAAGTAACAACTATGGATCGCTATATTAAGTACCACGTAAAAGAGTATGAGAGGACATTCGACGTTAAGTTCCCTTCCTGTTCAATTGCAGCAAAGAAGCACGTTGACCAAAGCACAACTATCTTGGATGTACAAGGAGTGGGTCTCAAAAGTTTGAACAAAGCTGCAAGGGATATCATCCAGCGTCTTCAGAAGATTGACGGGGACAACTATCCTGAGACCTTGAACCGTATGTTCATTATCAATGCTGGTTCTGGATTTAGGCTGTTGTGGAATACTATTAAGTCGTTTCTTGATCCTAAGACCACTGCCAAAATCCATGTTCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATAATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGTACCTGTGCTGACAAAGGTGGTTGTTTGCTTTCAGACAAGGGACCATGGAATGACACCGAAATCTTGAAGATGGTTCAAAATGGAGAAGGAAAATGTAAGAGGAAAACCTTATCCGGGATTGGAGAGAAAACAATCATTGAGAATGAAGCAGTATGTGAAAAGGAATGGAATTCTTTAAACAAAGAATCTGTGGCCCTGGAGGCATGCCATCATGTGCAACTCGGAGCTGTTCCAGAAGTCGCCTTTGTCCCAGTGATTGACAAGGGAGTTAATACATCTTGCAAAAAGGCCTCACAAAACGATCAATTTGCAGTTTCTAAAGATGATTCCGCTAGCAATGTTTCCAAGACTTCTAACGGGTTTAGAATTCCATTTACTGGTGGAATAATGGCCATTCTCACGGGAGTAATGGCAATAATACGCATGACAAAGAACATGCCAAGGAAATTCTCTCACGTTTCCTTGCATGGTAATTGTGATGACAACATGATGAAAGCACCTGCCATGACCATGGATGATCACACGACCCTGACGAAGCGAATGGCTGAACTAGAAGAGAAGGTGAATGTCCTATCTATGAAACCTACCATGTCAACTGAAATGGAAGAATTGATGAATAATGCTCTGAACAGAGTCAGCACCTTGGAACAAGAGTTGTCTACTACCAAAAAGTCTCTTGATGATGCCCATGCTCGACAAGTGGAGCTTCAAGCTCTCCTCTACAAAAAGAAAAAGAAGAAGTTGGTAGTGCTTTCGCTTACACAAGACATTGGGTTTGTTCTTGCAGTTCCGCTGGTA 1677 0.415 QEIEYSEDDKKTKLGSFKKVAISASSKFKHSLQKKGRRHSRVMSVAIEDDVDAEELQAIDALRQALILEELLPSKHDDHHMMLRFLKARKYDIEKTKQMWADMLQWRREFGADTIMEDFEFKEKDEVLKYYPQGNHGVDKEGRPVYIERLGQVDSNKLMQVTTMDRYIKYHVKEYERTFDVKFPSCSIAAKKHVDQSTTILDVQGVGLKSLNKAARDIIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCLLSDKGPWNDTEILKMVQNGEGKCKRKTLSGIGEKTIIENEAVCEKEWNSLNKESVALEACHHVQLGAVPEVAFVPVIDKGVNTSCKKASQNDQFAVSKDDSASNVSKTSNGFRIPFTGGIMAILTGVMAIIRMTKNMPRKFSHVSLHGNCDDNMMKAPAMTMDDHTTLTKRMAELEEKVNVLSMKPTMSTEMEELMNNALNRVSTLEQELSTTKKSLDDAHARQVELQALLYKKKKKKLVVLSLTQDIGFVLAVPLV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01763 559 Coils Coil 467 487 - -
Pste1g01763 559 Gene3D - 38 110 - -
Pste1g01763 559 SUPERFAMILY CRAL/TRIO N-terminal domain 49 119 IPR036273 -
Pste1g01763 559 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 123 297 IPR001251 -
Pste1g01763 559 SMART sec14_4 123 294 IPR001251 -
Pste1g01763 559 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 2 536 - -
Pste1g01763 559 PRINTS Cellular retinaldehyde-binding protein signature 250 269 - -
Pste1g01763 559 PRINTS Cellular retinaldehyde-binding protein signature 283 292 - -
Pste1g01763 559 PRINTS Cellular retinaldehyde-binding protein signature 81 103 - -
Pste1g01763 559 SMART CRAL_TRIO_N_2 78 103 IPR011074 -
Pste1g01763 559 Pfam CRAL/TRIO domain 129 291 IPR001251 -
Pste1g01763 559 Coils Coil 491 525 - -
Pste1g01763 559 Gene3D - 111 322 IPR036865 -
Pste1g01763 559 CDD SEC14 124 292 IPR001251 -
Pste1g01763 559 Pfam CRAL/TRIO, N-terminal domain 75 102 IPR011074 -
Pste1g01763 559 SUPERFAMILY CRAL/TRIO domain 123 319 IPR036865 -
Pste1g01763 559 FunFam SEC14 cytosolic factor 111 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01763 Pste-Chr1 5405559 5408884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01763 84 288 Acyl Lipid Metabolism Gene Families AT5G47730 28.910 1.84e-20 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01763 1 5405559 5408884 Pste1g01763 1 5405559 5408884 ECH
Pste1g01763 1 5405559 5408884 Pste7g01548 7 14201666 14205971 ECH