Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00819 ATGGATTTTCAGTTGGTACAGATAGTTGCACTGTTGATGGTGATAGCTTTTCGAGGCACAGGTTGGACTATTGAGGCATGCAGTTCCAATGAATTGGAAGCTTTGATGAGCTTCAAGAATGGAATTCAAAAGGACACATCTGGTAGATTAGCTAAGTGGGTTGGTCAGAGCTGCTGCAAGTGGGAAGGTATTGTTTGTGATAATGCAACTTCTAGAGTGACACAGATCAATCTCCCAGGATTCATTTCTACAGATACAGATTTATTTCAATCACAAATGAAAGGGTTGATTTCTCCTTCTATAACACTTCTCACCTCAATTGAAATCATTGATCTTGGTGGCTTAGTTGGTCTTAGTGGAACAATTCCACAGACCATTGGTTTGCACCTGCCAAAGCTCCAAAAGCTCTACCTTTATGGCAACAATTTAAGCGGTCCTATACCAGAAAGCATTGGAGAGTTGCCAAACCTCCAGGAACTGGCTCTGCAGGAAAATAGGCTATCTGGGTCAATCCCTATGAGTCTTGGAAGCCTAAAGAGTCTCAAAAGGTTTCTGCTTTATTCAAATCAGTTTTCAGGTATATTACCAGTCTCACTTGGGAATTTGACAAATTTGTTAGAATTGGATGTTCATGACAATGCTTTGACAGGTAATATTCCTAGTAGTGTTGGTGAGATGCAGGCTTTGAAAAAGCTTGATCTCTCTAACAATTTGTTAAGTGGAAAGATACCTTTTTCATTAACCAATTTAACTGTCATTTCTGTCTTGTACTTGAACAACAATCATCTTGAGGGAACCATTCCATTTCCTTCAAGATCTGGTGAAATGTCATCTCTAGGCTTCTTAAGACTCCATGATAATATCCTTGTTGGAAATATACCTTATAATTTTGGTTATTTGTTATCTCTTCAAAGAGTTTCATTATCAAACAACAAACTTGAAGGAGCACTGCCATCTAATTTAGGCAATTTGGTATCACTGACTGAGTTATATCTCAGTAGTAACTTCTTATCCGATCAAATACCAAAATCAATAGGGCAACTTTCTCAGCTCATATTGTTTAATATCTCTAGAAATTTGATTGAAGGGCCATTACCCCAAGAGATGTCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTCAACCGTCTAAATCTCTCTTCCATTCCAAAATGGATAGCAAACATGTCATCACTTTCCAACATTTACTTTGCGGGTTGTGGAATTCAGGGACAAATTCCAGAATTTTTCCAAACAACTAATAGTCCTATACAGGTATTGGACTTGTCAGTGAACCTTCTAAGTGGAAGCATACCATCATGGATAGGAAGCCTCAATCAACTGTACATGTTAAATCTCTCAAGGAACTTCCTTTATTCAGACATTCCAGATTCATTTAAAAGTTTGCAAGATCTAGGTGTCCTTGATCTTCACTCAAATAGGCTAACAGGTTCCATAGCTCTGGTATTTGACATAGAACATGGCATTTTGGGGGGATCACTGAAATTTATTGATCTTTCTGATAACAACTTCTCAAGTGGAATTGAGGAAATTGGTGGAGGGCAATGTGATATTCAGTTGCTCAATTTGTCTCATAACCTTCTTCAAGGTAGGTTACCAAATTCAATTGGGAGACTGAATTCACTTAACATTTTGGATTTGAGCTTCAATGAGTTAGGCTCCAACTTGCCAGAGGTGCTGGCAAATTTAACTTCATTGGAGAGATTGAAGCTGCAGGAAAATCACTTCACTGGTAAAATTCCATATGGATTTCTCAAGTTGTTAAAGCTGAAGGAATTAAATTTATCTAACAATCATCTTGAAGGGGAAATTCCAGAGGGCAAACCTTTGACTGACTTTCCTGAGAGCTCATATTCAGGAAATAAAGGGTTATGTGGAAAGCCTCTAAGTCCTTGTAAACTTTGA 1929 0.379 MDFQLVQIVALLMVIAFRGTGWTIEACSSNELEALMSFKNGIQKDTSGRLAKWVGQSCCKWEGIVCDNATSRVTQINLPGFISTDTDLFQSQMKGLISPSITLLTSIEIIDLGGLVGLSGTIPQTIGLHLPKLQKLYLYGNNLSGPIPESIGELPNLQELALQENRLSGSIPMSLGSLKSLKRFLLYSNQFSGILPVSLGNLTNLLELDVHDNALTGNIPSSVGEMQALKKLDLSNNLLSGKIPFSLTNLTVISVLYLNNNHLEGTIPFPSRSGEMSSLGFLRLHDNILVGNIPYNFGYLLSLQRVSLSNNKLEGALPSNLGNLVSLTELYLSSNFLSDQIPKSIGQLSQLILFNISRNLIEGPLPQEMSSLQNLQTLDLSFNRLNLSSIPKWIANMSSLSNIYFAGCGIQGQIPEFFQTTNSPIQVLDLSVNLLSGSIPSWIGSLNQLYMLNLSRNFLYSDIPDSFKSLQDLGVLDLHSNRLTGSIALVFDIEHGILGGSLKFIDLSDNNFSSGIEEIGGGQCDIQLLNLSHNLLQGRLPNSIGRLNSLNILDLSFNELGSNLPEVLANLTSLERLKLQENHFTGKIPYGFLKLLKLKELNLSNNHLEGEIPEGKPLTDFPESSYSGNKGLCGKPLSPCKL 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00819 642 Gene3D Ribonuclease Inhibitor 369 642 IPR032675 -
Pste7g00819 642 Gene3D Ribonuclease Inhibitor 85 367 IPR032675 -
Pste7g00819 642 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pste7g00819 642 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 364 642 - -
Pste7g00819 642 ProSiteProfiles Leucine-rich repeat profile. 597 619 IPR001611 GO:0005515
Pste7g00819 642 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 84 338 - -
Pste7g00819 642 Gene3D Ribonuclease Inhibitor 23 84 IPR032675 -
Pste7g00819 642 SUPERFAMILY L domain-like 56 385 - -
Pste7g00819 642 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 8 416 - -
Pste7g00819 642 SUPERFAMILY L domain-like 275 628 - -
Pste7g00819 642 ProSiteProfiles Leucine-rich repeat profile. 374 394 IPR001611 GO:0005515
Pste7g00819 642 Pfam Leucine rich repeat 327 385 IPR001611 GO:0005515
Pste7g00819 642 PRINTS Leucine-rich repeat signature 229 242 - -
Pste7g00819 642 PRINTS Leucine-rich repeat signature 372 385 - -
Pste7g00819 642 Pfam Leucine Rich Repeat 229 250 IPR001611 GO:0005515
Pste7g00819 642 Pfam Leucine Rich Repeat 597 613 IPR001611 GO:0005515
Pste7g00819 642 Pfam Leucine Rich Repeat 132 153 IPR001611 GO:0005515
Pste7g00819 642 SMART LRR_sd22_2 226 252 - -
Pste7g00819 642 SMART LRR_sd22_2 547 566 - -
Pste7g00819 642 SMART LRR_sd22_2 324 350 - -
Pste7g00819 642 SMART LRR_sd22_2 130 156 - -
Pste7g00819 642 SMART LRR_sd22_2 372 389 - -
Pste7g00819 642 SMART LRR_typ_2 446 469 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 324 348 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 130 154 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 300 323 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 595 628 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 202 226 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 178 201 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 547 570 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 372 397 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 571 594 IPR003591 -
Pste7g00819 642 SMART LRR_typ_2 470 493 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00819 Pste-Chr7 7635844 7637772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00819 2 642 Receptor kinase-like Gene Family AT4G08850 32.319 1.42e-87 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00819 7 7635844 7637772 Pste7g00819 7 7635844 7637772 ECH
Pste1g00528 1 1698870 1700801 Pste7g00819 7 7635844 7637772 PCT