Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00528 ATGAACTATCAGCTGCTGCAGATAGCTGCATTGCTGACAGTGATAGCATTTGGAGGAGCAATAAGGAAAACAACAGGAGCATGCAGTTCAGATGACTTGGAAGGTTTGATGGGCTTCAAGAATGGCATTCAGATGGATACATCTGACAGGTTGGCAAAGTGGGTTGGTAGGAGCTGCTGTGAATGGGAAGGTGTAGTCTGTGACAATGCAACCACAAGAGTGACGCAAATTAATCTCCCAGGACTCATTGAAAAAGATTTGGTTCAAACCCAAATGGTAGGCCAGTTATCTCCTTCCATAACACTCCTCACCTCTCTTGAAATCCTTGATCTTGGTGGCTTAGCAGGCCTCAGTGGAACCATTCCACAAACAATTGGTTTGCAAATGCCGAAGCTGCAAAAGCTTTATCTTCATGGCAACAATTTAACTGGCCCAGTACCAGAAAGCATTGGGGATATGCCTAACCTCCAGGAACTGGCACTGCATGAAAATAGAATATCTGGGTCACTCCCTTCTAGCCTTGGAGGCTTAAAAAATCTCAAAAGGCTGCTGCTTTACTCCAACCAAATTTCAGGTATAATACCCATTTCACTTGGGAATTTGACCAATTTAGTAGAATTAGATGTTCATGACAATGCTCTTACGGGTTATATACCCGATAGCATTGGTCAAATGCAGGGTCTGGAGAAGCTTGATCTTTCAAGCAATATGCTGAGTGGAGGCATACCTTCTTCTCTAACTAATTTAACGGCCATTTCAGTTTTGTATTTAAACACAAACTATCTTGAGGGAACCATCCCATTTCCCTCAAGATCTGGTGAAATGCCTTCTCTTGGCTTCTTAAGACTCCACAATAACCATCTGAGTGGAAATATACCTGCCAGTTTTGGTTACCTGGTTTCTCTTCAAAGAGTTTCATTATCAAAAAACAAACTTGAAGGAGCTCTGCCTTCTAGTTTGGGCAAGTTGCATTCTTTGACAGAACTTTACCTCAGTGACAATTTGTTGTCTGGCCAAATACCAAAATCAATTAGTCTACTCTCTCAGCTCATAATGTTGAACATTTCCAATAATTTGATTGAAATTCCATTGCCTCAAGAGATGTCTTCCCTTCAAAACCTTCAGACACTTGATCTCTCTTTCAACCCTCTGAACCTCTCTTCCATCCCACAATGGCTAACAAGTCTATCATCGCTTTCCCGCATTTACCTTGCAGGGTGTGGCATCAAAGGCCAAATTCCAGACTCATTGCAAACAACAGAAAGTCCAATACAGGAACTGGACTTATCAGAGAACCTTCTCAGTGGACCCTTACCGACATGGATAGGATCCCTCAGTCAGCTATATTTGTTAAACCTCTCAAGGAATTTACTTGATTCACACATACCTGATTCCCTAACAAACTTGTCTGGTCTTGGTGTTCTTGATCTTCACTCAAATAAGTTATCAGGCTCAATAACTAGAGTATTTGACACTGAACAAGGTAATTCTGGTGGGGGTTCACTAACATACATTGATCTTTCTGATAACAACTTCTCAAGTGGTGTTGATGCAATTGGTGTGGGAGAGCAGTTAAACATGCAGTACCTGAATTTGTCTCATAACCTTCTGAATGGTACATTGCCAAGTTCCCTTGGGAGGCTCAACTCCATTCACAGTTTGGATTTGAGCTTCAATGAATTAGCCTCCAACTTGCCTGAGGTGCTGGCAAAGTTGACCATGTTGGAGAGACTGAAGCTGCAAAGCAACCATTTCAGTGGTAATATACCAAGTGGATTTCTCAAGTTGAGAAAGCTGAAGGAATTGGATTTATCAGATAATGTACTTGAAGGGGAAATTCCAAAGGGTAAACCTCTAATTGACTTTCCTGGGAGCACTTATTCTGGAAATAAAGGTTTGTGTGGGAAGCCTCTTGGTCCCTGTAAATTTTGA 1932 0.4172 MNYQLLQIAALLTVIAFGGAIRKTTGACSSDDLEGLMGFKNGIQMDTSDRLAKWVGRSCCEWEGVVCDNATTRVTQINLPGLIEKDLVQTQMVGQLSPSITLLTSLEILDLGGLAGLSGTIPQTIGLQMPKLQKLYLHGNNLTGPVPESIGDMPNLQELALHENRISGSLPSSLGGLKNLKRLLLYSNQISGIIPISLGNLTNLVELDVHDNALTGYIPDSIGQMQGLEKLDLSSNMLSGGIPSSLTNLTAISVLYLNTNYLEGTIPFPSRSGEMPSLGFLRLHNNHLSGNIPASFGYLVSLQRVSLSKNKLEGALPSSLGKLHSLTELYLSDNLLSGQIPKSISLLSQLIMLNISNNLIEIPLPQEMSSLQNLQTLDLSFNPLNLSSIPQWLTSLSSLSRIYLAGCGIKGQIPDSLQTTESPIQELDLSENLLSGPLPTWIGSLSQLYLLNLSRNLLDSHIPDSLTNLSGLGVLDLHSNKLSGSITRVFDTEQGNSGGGSLTYIDLSDNNFSSGVDAIGVGEQLNMQYLNLSHNLLNGTLPSSLGRLNSIHSLDLSFNELASNLPEVLAKLTMLERLKLQSNHFSGNIPSGFLKLRKLKELDLSDNVLEGEIPKGKPLIDFPGSTYSGNKGLCGKPLGPCKF 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00528 643 Gene3D Ribonuclease Inhibitor 270 352 IPR032675 -
Pste1g00528 643 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Pste1g00528 643 Pfam Leucine rich repeat 280 336 IPR001611 GO:0005515
Pste1g00528 643 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Pste1g00528 643 Pfam Leucine rich repeat 424 482 IPR001611 GO:0005515
Pste1g00528 643 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Pste1g00528 643 SMART LRR_sd22_2 177 198 - -
Pste1g00528 643 SMART LRR_sd22_2 596 611 - -
Pste1g00528 643 SMART LRR_sd22_2 323 349 - -
Pste1g00528 643 SMART LRR_sd22_2 201 222 - -
Pste1g00528 643 SMART LRR_sd22_2 371 388 - -
Pste1g00528 643 SMART LRR_sd22_2 225 251 - -
Pste1g00528 643 SMART LRR_sd22_2 548 567 - -
Pste1g00528 643 SMART LRR_typ_2 201 224 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 275 298 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 548 571 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 299 322 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 323 347 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 572 595 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 177 200 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 445 468 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 371 396 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 469 492 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 225 249 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 596 618 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 153 176 IPR003591 -
Pste1g00528 643 SMART LRR_typ_2 129 152 IPR003591 -
Pste1g00528 643 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 268 - -
Pste1g00528 643 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 363 643 - -
Pste1g00528 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 559 637 - -
Pste1g00528 643 Gene3D Ribonuclease Inhibitor 82 269 IPR032675 -
Pste1g00528 643 Gene3D Ribonuclease Inhibitor 25 81 IPR032675 -
Pste1g00528 643 Gene3D Ribonuclease Inhibitor 353 643 IPR032675 -
Pste1g00528 643 FunFam Leucine-rich repeat receptor protein kinase EMS1 269 361 - -
Pste1g00528 643 SUPERFAMILY L domain-like 385 641 - -
Pste1g00528 643 PRINTS Leucine-rich repeat signature 371 384 - -
Pste1g00528 643 PRINTS Leucine-rich repeat signature 228 241 - -
Pste1g00528 643 ProSiteProfiles Leucine-rich repeat profile. 325 347 IPR001611 GO:0005515
Pste1g00528 643 Pfam Leucine Rich Repeat 373 390 IPR001611 GO:0005515
Pste1g00528 643 SUPERFAMILY L domain-like 57 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00528 Pste-Chr1 1698870 1700801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00528 27 641 Receptor kinase-like Gene Family AT4G08850 32.881 8.24e-88 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00528 1 1698870 1700801 Pste7g00819 7 7635844 7637772 PCT