Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00692 CTTTGCCCTTTATGCTATTCGGTTTCTCCAATAATATCTCAGGAAGCCAAGAAGAGCCAAACAGAGTGTTACTTGAAAGATTGTCCTCACAGAGAAAGAAAGAGGTTTGGCCATGGCTGATGAGAGCGTTGTTGAGTCCCCAGTGAAGAGGCAGAGAGATGATGAGGAAAATGAGGCCTCTGTTTCCATGGATGTGGAGGGTGGCAAAGACCCTCATGCTGATGCTTTATCATCTGTGATTCCTGGGTGGTTCTCTGAATTCAGTTCACTGTGGCCTGGAGAGGCTCATTCCTTAAAGGTGGAAAAGATTTTGTTTCAAGGAAAGTCTGAATATCAGAATATCTTGGTCTTCCAGTCATCAACATATGGCAAGGTTCTTGTTTTGGATGGAGTAATTCAACTAACAGAGAGAGACGAATGTGCTTACCAAGAAATGATCACTCATCTTCCTCTTTGCTCTATTCCAAACCCCAAAAAGGTTTTGGTTATAGGTGGAGGTGATGGAGGGGTCCTACGAGAAGTAGCACGCCATTCTTCAGTTGAAAAGATAGACATTTGTGAAATAGACAAGATGGTTGTTGATGTCTCCAAACAATACTTCCCTGATGTAGCTGTAGGGTACAAGGATCCTCGAGTAGCACTTCATATTGGTGATGGAGTTGCATTTCTAAAGGAAGTTCCAGAAGGAACTTATGATGCTGTTATAGTGGATTCATCTGACCCTATTGGTCCTGCTCAGGAGCTTTTTGAAAAGCCCTTCTTTGAGTCAGTTGCAAAGGCTCTTCGTCCAGGTGGAGTTGTGTGTACTCAGGCCGAAAGCATATGGCTTCATATGGACATAATCGAGGACATCGTGGCCAATTGTCGCCAGATTTTTGAAGGCTCTGTCAACTATGCTTGGACTACTGTTCCTACATACCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACCGAGGGACCATCTGTTGATTTCAAGCATCCAGTGAATCCTATAGATGAAAAGGAGTGTCAGAACTCAGCAAGACCACTGAAATTTTACAACTCTGAGATTCATTCAGCAGCTTTCTGTTTGCCATCATTTGCAAAGAGGAAGATAAGTGCTAAAACAAATTAAGAAGATTTTCGAAAGCTTTGAAGGAGCTCAAGTGACTGTGGTAGAAGTCCAACGTTCATCCTCGCTGGATTGGTCCATCTATCAATGAGCCATGAATAAGTCAGAGATTAAACTTGGCATTGAAGAGTAACGTTTATTTCTGGGAATGAGTTTTAGGTGATAATGATAGTTGATGGATTCAGTTGTCAGTAACTTTCCTCATAAAAACAATTGACAATGTGGAACTATGATTATCTGTTAAGAAAAATTTTGGTCAATGCAAATTGTTGTTACTGATATGTTTTGAAATTTATATGCGC 1416 0.4131 MADESVVESPVKRQRDDEENEASVSMDVEGGKDPHADALSSVIPGWFSEFSSLWPGEAHSLKVEKILFQGKSEYQNILVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEKIDICEIDKMVVDVSKQYFPDVAVGYKDPRVALHIGDGVAFLKEVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVCTQAESIWLHMDIIEDIVANCRQIFEGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDEKECQNSARPLKFYNSEIHSAAFCLPSFAKRKISAKTN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00692 334 Pfam Spermine/spermidine synthase domain 102 289 - -
Pste7g00692 334 Gene3D Spermidine synthase, tetramerisation domain 26 98 IPR037163 -
Pste7g00692 334 PIRSF Spermidine_synth 35 334 IPR030668 GO:0006595
Pste7g00692 334 PANTHER SPERMIDINE/SPERMINE SYNTHASE 37 331 IPR001045 GO:0003824
Pste7g00692 334 Pfam Spermidine synthase tetramerisation domain 45 99 IPR035246 -
Pste7g00692 334 FunFam Spermidine synthase 1 97 334 - -
Pste7g00692 334 CDD AdoMet_MTases 122 233 - -
Pste7g00692 334 MobiDBLite consensus disorder prediction 1 33 - -
Pste7g00692 334 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 44 281 IPR030374 -
Pste7g00692 334 Hamap Polyamine aminopropyltransferase [speE]. 45 330 IPR001045 GO:0003824
Pste7g00692 334 FunFam Spermidine synthase 1 37 96 - -
Pste7g00692 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 42 329 IPR029063 -
Pste7g00692 334 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 123 136 IPR030373 -
Pste7g00692 334 Gene3D Vaccinia Virus protein VP39 99 334 IPR029063 -
Pste7g00692 334 NCBIfam spermidine synthase 46 324 IPR001045 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00692 Pste-Chr7 6339928 6343932 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00692 7 6339928 6343932 Pste7g00692 7 6339928 6343932 ECH
Pste1g02049 1 6419619 6423349 Pste7g00692 7 6339928 6343932 PCT