Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02049 GTTTGTTTTACCCCTCACCTACCATGAGAAACACACAAAAATTAACACTTATTTACAGGCATAACATCACATGAAATTATTTGCACATATATAATAACAGCTATATAAGGAGGAGGAAAAATAGAGGGTTACGATTGTGCGTGCTACTTCAGAGAGATGGCTGCAGAAAACGTAGTTGATATCTCCGACTTATCAGTGAAGAGGCAAAGAGACGAAGAAGACGGAGCTCAAAATGGCGTCTCCGACACCCTTTCGACGCTATCCAACGATTCCCTGTACCCTGGCTTCTCTGCGGTTATTCCCGGTTGGTTCTCTGAAATCAGCCCAATGTGGCCCGGGGAGGCTCATTCCTTGAAGGTGGACAAAATTCTGTTTCAAGGGAAGTCTGACTATCAGAATGTCCTGGTCTTCCAGTCAGCTACTTATGGCAAGGTTCTTGTCCTAGATGGTGTCATTCAGCTCACAGAAAGGGATGAGTGTGCCTACCAAGAGATGATCACTCATCTTCCTCTTTGCTCTATTCCAAACCCCAAAAAGGTTTTGGTTATTGGTGGAGGAGATGGTGGGGTCCTGCGGGAAGTAGCACGCCATGCCTCAGTAGAGAAGATAGACATTTGTGAAATAGACAAGATGGTTATTGATGTCTCCAAACAATTTTTCCCCAGTGTAGCTGTAGGCTTTGATGACCCTCGTGTGACACTTAATGTTGGTGATGGAGTTGCGTATTTGAAGAATGTTCCGGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGACCCTATTGGTCCTGCCCAAGAGCTGTTTGAAAAGCCTTTTTTCTCATCTGTTGCGAAAGCTCTTCGCCCAGGAGGAGTTGTGTGTACTCAAGCAGAAAGTATATGGCTTCATATGCATATTATTGAGGATATTGTGGCTAACTGTCGCCAGGTATTCAAAGGTTCTGTCAACTATGCATGGACCACGGTTCCCACATACCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGCCCTCCTGTTGACTTCAAGCATCCAGTGAATCCTATAAACGATAATGATAGCCTGCAGTCAGCAAGACCATTGAAATTTTACAACTCTGAGATTCACACAGCTGCTTTCTGTTTGCCATCTTTTGCTAAGAAGAAGATTGATTCTAAAGCAAATTGAGAATACTTTTCATGGGATTGAAGTAGAAAGTATGACCCTAGGGATTCATCCTTTTATTGGATTACTCCATCCATCAACAAACTTTGCAATAAGTCAAGAGCTTCAAGATGACATTGAAGAGCAACTTTTATTTAATGAAATGGCTAGCAGAGGATGGATTCAATTATTAGTAATTTTACGTTATCACGAAACTTGAGTAGTTGAGAAAACATTTTGTTTGATGGACATGCATGCATTTTATCTCTTTAAAATTTGTTCTTTCAGCTTTTTTATTAGTGACTTTTGTTCTTTAGTATAATTACCAGTTTAGTTTATATTTTGGTGTTGTGATATACAATTATTGATTAGTTTTAAAAAAAAATGCTATTGAAATTTAATTTTGAAAGGAACAAGCACAAAAGATAAGAAAACAATATAAAATAAAGAAATAAATATGAAAGATTAATAGATTAAGAAAACTAAGCAATAGCATGTGACAGGTTCTAATGTGGTGGATCACCTTTGCAGGTGGCTCATCATGAATCAGTACGTTTTAATAATCCTTAGATTTATGAATGTGTAAAATATCATGACAGTGAAACATTTCTTCATTTCCCTTCAACTTGTCTCTTTCCCTAATGGCTGTGCTTCCGTGGTCATCGATGTTGAGCTTCCTTTGCTGTTGAACTAAACTAGGACAGTAGTTCGTAGCCTTTGCATTCACTTGTTTGCAAGATAATAGTCCCTACTCTCTATTCTATATTAAGTGGCACAACCCCATTGTGCACTTCTAATTCGAGCAACTAGTCTCCAAATGCTACAAAAAATAAGCAGTGCAACCCCCACCACTCAAGACTCTACATAATTGAATTCACGTGTTACTTGTTTAATTTTGAATTTGAATGAAAAAATTATCAAGTGTTTTTTTTATTTGGAATTCAGAGTGAAAATTTTAACAATGTGAATGAAAAGGACTAAATTGATTTCGGCAAACCAGTAATTAATTGATGATGTCAGGGGTATGGCAACAGTGCTAGGTGGCAGTGTGGTAACTGCAGTTGTGACAGTAAGGAAACAAGAGGATGGAGATATTATGATGTAGGAAGTTCTACAATAATATTTTAGACCTTTATAAATCTAAGTGTTACAATATGTATTGGTGATCAGTAATTTTTTTTTTTTATTTTTTATTTAAAGCAATGTGTTATTGTTGTACTAGTTAATTTCTATGTTATGCAAATTTTTATTAAGAGACGCTGGC 2416 0.3754 MAAENVVDISDLSVKRQRDEEDGAQNGVSDTLSTLSNDSLYPGFSAVIPGWFSEISPMWPGEAHSLKVDKILFQGKSDYQNVLVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASVEKIDICEIDKMVIDVSKQFFPSVAVGFDDPRVTLNVGDGVAYLKNVPEGTYDAVIVDSSDPIGPAQELFEKPFFSSVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPPVDFKHPVNPINDNDSLQSARPLKFYNSEIHTAAFCLPSFAKKKIDSKAN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02049 339 Pfam Spermidine synthase tetramerisation domain 50 104 IPR035246 -
Pste1g02049 339 Gene3D Vaccinia Virus protein VP39 102 339 IPR029063 -
Pste1g02049 339 PANTHER SPERMIDINE/SPERMINE SYNTHASE 44 337 IPR001045 GO:0003824
Pste1g02049 339 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 49 286 IPR030374 -
Pste1g02049 339 MobiDBLite consensus disorder prediction 1 29 - -
Pste1g02049 339 Pfam Spermine/spermidine synthase domain 107 294 - -
Pste1g02049 339 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 128 141 IPR030373 -
Pste1g02049 339 Gene3D Spermidine synthase, tetramerisation domain 43 101 IPR037163 -
Pste1g02049 339 PIRSF Spermidine_synth 42 339 IPR030668 GO:0006595
Pste1g02049 339 MobiDBLite consensus disorder prediction 11 25 - -
Pste1g02049 339 NCBIfam spermidine synthase 51 329 IPR001045 GO:0003824
Pste1g02049 339 CDD AdoMet_MTases 127 238 - -
Pste1g02049 339 FunFam Spermidine synthase 1 42 101 - -
Pste1g02049 339 FunFam Spermidine synthase 1 102 339 - -
Pste1g02049 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 335 IPR029063 -
Pste1g02049 339 Hamap Polyamine aminopropyltransferase [speE]. 50 335 IPR001045 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02049 Pste-Chr1 6419619 6423349 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02049 1 6419619 6423349 Pste1g02049 1 6419619 6423349 ECH
Pste1g02049 1 6419619 6423349 Pste7g00692 7 6339928 6343932 PCT