Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00356 TTTTGCAATTGCATGCTTTGGTACTCTTTTTACTCACATTTCCAACATCATCCATAGCTGAAGGGATGATAACTTTGAATATTGTGAATTTTGGGGCCAAAGCAGATGGTGAAACTGACTCCACAAAAGCATTCCTCAGTGCATGGAATAGAGCATGCAGCTCAACAACACCAACCACCATTTATGTGCCACTTGGAAGGTTCTTAGTTGGAAAATGTTTAAGTGGTCGGTGCAGCAACAACGGCATCACAATACACATTGATGGTGCACTTTTTGCACCCTCCAATTATGATGTTATTGGAAATGCTAGGAATTGGTTGTTTTTTTATGATCTTCACTCATTGGTGGTGTTCTTGATGGCCAAGGCACAGGTCTGTGGGCATGTAAGAGATCTGGCGAGACTTGTCCAAGCGAACTTGCGATTTACCAATTGCAATAACATTGTGATAAATGGAGTGACCTCTGTGAACAGCCAAATATTCCATATTGATAATGTGAAAGTGCAAGGTGTTAAGGTATCAGCTGCAGGAAATACTACAAACACTGATGGCATACATGTTCAACACTCATCAAGTGTCACCATTCTTAACTCCAACATAGCAACTGGTGATGATTTCATCTCAATTGGTCCTGGAACTACTAATTTGTGGATACAAAACATAGCTTGTGGACCAGAACCTGGTGTGCAGAATGTGACAGTTAAAACAGTGACATTTACTGGAACTGCAAATGGTGTACGAATTAAATCTTGGGGAGACCTAGCAACGGATTTGCAAGGAACATCCTTTTCCAACATGTTACCATGGTTAATGACCAAAATCCCATTGTTATTGACCCAAATTATTGCCCCCATCAAAAGAATTGTCCTGGTTTCTGGGGTTGAAATTAGCAATATTATGTACCAAGATATTCATGGAACTTCAGCAACACAAGTTGCAGTTAAAATGAATTGTAGTCCAAAGTATCCATGCACCCGAATAAGTTTGGAAGATGTGATGCTTACATATGAAAACAGGAATGCTGTGGCTTCATGCACTCATGCTGGAGGAATTACATCTGGTGTTATTCAACCCAAGAACTGCTTCTTGAAGAACAGTATTCGAGCTAGAGGAGGAGCA 1118 0.4043 MITLNIVNFGAKADGETDSTKAFLSAWNRACSSTTPTTIYVPLGRFLVGKCLSGRCSNNGITIHIDGALFAPSNYDVIGNARNWLFFYDLHSLVVFLMAKAQVCGHVRDLARLVQANLRFTNCNNIVINGVTSVNSQIFHIDNVKVQGVKVSAAGNTTNTDGIHVQHSSSVTILNSNIATGDDFISIGPGTTNLWIQNIACGPEPGVQNVTVKTVTFTGTANGVRIKSWGDLATDLQGTSFSNMLPWLMTKIPLLLTQIIAPIKRIVLVSGVEISNIMYQDIHGTSATQVAVKMNCSPKYPCTRISLEDVMLTYENRNAVASCTHAGGITSGVIQPKNCFLKNSIRARGGA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00356 351 SUPERFAMILY Pectin lyase-like 3 341 IPR011050 -
Pste7g00356 351 Gene3D - 2 347 IPR012334 -
Pste7g00356 351 Pfam Glycosyl hydrolases family 28 31 324 IPR000743 GO:0004650|GO:0005975
Pste7g00356 351 SMART pbh1 141 167 IPR006626 -
Pste7g00356 351 SMART pbh1 168 198 IPR006626 -
Pste7g00356 351 SMART pbh1 207 228 IPR006626 -
Pste7g00356 351 PANTHER - 3 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00356 Pste-Chr7 3386705 3391223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00356 3 340 Glycoside Hydrolase AT2G43870 47.425 1.60e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00356 7 3386705 3391223 Pste7g00356 7 3386705 3391223 ECH
Pste7g00356 7 3386705 3391223 Pste5g00299 5 2021229 2025459 PCT