Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00043 ATGCACCCTGCATTATGGGGTTATCAGGTGGGAAATAGCTGGAGAACCACTGATGACATTAGAGATCGATGGGAAAGTATGATTTCGAAGGCAGATATAAATGAAGTTTATGCTAATTATGCTAGACCTGGTGGCTGGAATGATCCTGACATGCTTGAGGTAGGAAATGGAGGGATGACGAAAAATGAATATGTTGTTCACTTTAGTTTATGGGCCATTTCCAAGGCCCCTCTTATTATTGGCTGTGATGTTCGCAATATGACTGAAGACACTAAAGAGATACTATCAAATGCGGAAGTGATAGCAGTTAACCAAGATCCACTTGGTATACAAGGTAAAAAGGTTAGGAATGGTAATCTGGAGGTTTGGGCAGGTCCTCTTTCAGGATACAGCGTGGCAGTTGTGTTACTCAATAAATACTCCTATCGTCGTGCGCCCGTTACTGCTCTCTGGGAAGATATTGGCCTTGACCCTTCAACTGTTGTTCAAGCCAGAGACCTTTGGGAGCACAAGACATTGGAAAGACAATTCGTGGGTAGTTTGACTGCCACCCTTGAACCGCATTCTTGCAAAATGTATGTGTTGAAGCCAGTAGCATGA 600 0.435 MHPALWGYQVGNSWRTTDDIRDRWESMISKADINEVYANYARPGGWNDPDMLEVGNGGMTKNEYVVHFSLWAISKAPLIIGCDVRNMTEDTKEILSNAEVIAVNQDPLGIQGKKVRNGNLEVWAGPLSGYSVAVVLLNKYSYRRAPVTALWEDIGLDPSTVVQARDLWEHKTLERQFVGSLTATLEPHSCKMYVLKPVA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00043 199 SUPERFAMILY Glycosyl hydrolase domain 108 198 - -
Pste7g00043 199 Gene3D Aldolase class I 1 108 IPR013785 -
Pste7g00043 199 PRINTS Glycosyl hydrolase family 27 signature 41 60 IPR002241 GO:0004553|GO:0005975
Pste7g00043 199 PRINTS Glycosyl hydrolase family 27 signature 62 83 IPR002241 GO:0004553|GO:0005975
Pste7g00043 199 SUPERFAMILY (Trans)glycosidases 2 107 IPR017853 -
Pste7g00043 199 FunFam Alpha-galactosidase 109 198 - -
Pste7g00043 199 Pfam Alpha galactosidase A 10 106 IPR002241 GO:0004553|GO:0005975
Pste7g00043 199 Pfam Alpha galactosidase C-terminal beta sandwich domain 118 195 IPR041233 -
Pste7g00043 199 Gene3D - 109 198 IPR013780 -
Pste7g00043 199 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 3 197 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00043 Pste-Chr7 378743 380108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00043 3 195 Glycoside Hydrolase AT5G08370 62.437 3.37e-81 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01784 5 11309062 11312904 Pste7g00043 7 378743 380108 PCT