Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01784 GGATCTTGTGTTTCTCACTGCAGGTGAAGAAGTGAAAAAGTGCTGAAGTGAGCACAATGGAGAGAAGGATTCGCAATGGGATGGTGGTGGCTTTGGTGACCCTTTTGGTTTTCTCATGGACTTGTGCCACTGCTTTGTCGTCAGGGCCAACAAATCTCCTTGACCATGTGGAGCAATTCAGGAGGAATCTGCTTGCCAATGGCCTAGGTAGAACTCCTCCAATGGGGTGGAACAGTTGGAATCATTTTACTTGTCAAATCAACGAAAAGATTATCAGAGAAACTGCTGATGCCCTTGTTTCTAGTGGTCTTTCCAAGCTTGGATATACATATGTCAATATAGATGATTGTTGGGCTGAATTAAATCGGGATGCTAAGGGTAATTTGGTAGCAAAAAACTCAACCTTTCCTTCTGGAATCAAAGCTCTTGCAGACTATGTTCACAACAAGGGTCTTAAGCTTGGCATTTACTCAGATGCTGGGTATTATACTTGTAGCAAACTGATGCCTGGTTCACTTGGTCATGAGTTTCAAGATGCCAAGACTTTTGCATCATGGGGCATTGATTATTTGAAGTATGATAACTGTTTCAATGATGGTTCAAAACCAACTGATAGATATCGTGTTATGACTCGGGCTTTAATGATGGCTGGCCGTCCAATCTTCTTCTCACTATGTGAATGGGGAGATTTGCACCCTGCTTTATGGGGTGTTAAAGTGGGAAATAGCTGGAGAACCACTGGTGACATTAATGATTCATGGGAAAGCATGATTTCAAGGGCAGACATGAATGAAGTTTATGCTGAGTATGCAAGACCTGGTGGATGGAATGATCCTGACATGCTTGAGGTGGGAAATGGAGGGATGACAAAAAATGAATATATTGTTCACTTCAGCTTGTGGGCCCTTTCCAAGGCTCCTCTTCTTCTTGGCTGTGATGTTCGAAATATGACTAAAGACATTATAGAGATCGTATCAAATAGGGAGGTTATTGCAGTTAACCAAGATTCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCCTGAGATTTGGGCAGGTCCTCTTTCAGGATACAGGGTAGCTGTTGTCTTGCTTAATCGTGGCCCTTGGAGGATTAGCATAACAGCCACTTGGGATGACATTGGTATTCCACCGAAAACTGTTGTTAAAGCAAGGGACCTATGGGAGCACAAGACATTGAACACAACCTTCGTGGATAAATTGACTGCCACAGTAGACCCACATGCCTGTAAAATGTACGTGCTGAAGCCAATTTCTTGAGTTCCGAACATTTTTGGATTGCAGCTTTTGGAGTCACTGATGTCAATATTTGCTTCTGTTGATAGAAGCTTGCTTCATTATTAAGTGTACCAGTTTAACGGAACCAGTGATTCAAATGAAATAAAATAAAGCTGTTGACATGCAAAATCATTTTAGTATTTTGCTTCCTTATATTCCAAAAGTCTTCTGTACTTGACACATGAAAAATATCTACTTTTTGGAGTATGCAAGAGTGAGGTAAAGGGCCAAGGATAAGGTAGTTTTTTCTTTGCTATAAATATGATAGAAGTATTTCCTTCTTGCTTTAGCTTGATTGCTTTCATTTAATGAGATAGATGATGAGAAGATCCACA 1642 0.4086 MERRIRNGMVVALVTLLVFSWTCATALSSGPTNLLDHVEQFRRNLLANGLGRTPPMGWNSWNHFTCQINEKIIRETADALVSSGLSKLGYTYVNIDDCWAELNRDAKGNLVAKNSTFPSGIKALADYVHNKGLKLGIYSDAGYYTCSKLMPGSLGHEFQDAKTFASWGIDYLKYDNCFNDGSKPTDRYRVMTRALMMAGRPIFFSLCEWGDLHPALWGVKVGNSWRTTGDINDSWESMISRADMNEVYAEYARPGGWNDPDMLEVGNGGMTKNEYIVHFSLWALSKAPLLLGCDVRNMTKDIIEIVSNREVIAVNQDSLGVQGKKVRMEGDPEIWAGPLSGYRVAVVLLNRGPWRISITATWDDIGIPPKTVVKARDLWEHKTLNTTFVDKLTATVDPHACKMYVLKPIS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01784 410 ProSitePatterns Alpha-galactosidase signature. 89 105 IPR000111 GO:0004553|GO:0005975
Pste5g01784 410 Gene3D Aldolase class I 46 319 IPR013785 -
Pste5g01784 410 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 11 408 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 48 67 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 160 177 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 273 294 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 125 146 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 252 271 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 84 99 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 PRINTS Glycosyl hydrolase family 27 signature 187 205 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 CDD GH27 54 317 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 SUPERFAMILY Glycosyl hydrolase domain 312 406 - -
Pste5g01784 410 FunFam Alpha-galactosidase 320 409 - -
Pste5g01784 410 Pfam Alpha galactosidase C-terminal beta sandwich domain 329 406 IPR041233 -
Pste5g01784 410 Gene3D - 320 409 IPR013780 -
Pste5g01784 410 FunFam Alpha-galactosidase 46 319 - -
Pste5g01784 410 Pfam Alpha galactosidase A 53 317 IPR002241 GO:0004553|GO:0005975
Pste5g01784 410 SUPERFAMILY (Trans)glycosidases 47 317 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01784 Pste-Chr5 11309062 11312904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01784 43 406 Glycoside Hydrolase AT5G08370 67.582 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01784 5 11309062 11312904 Pste7g00043 7 378743 380108 PCT
Pste7g00045 7 380375 382191 Pste5g01784 5 11309062 11312904 PCT