Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04389 atgaatgcgatggcgtggtgcttgtttgtgttaacccttttgctgtctgtggtgtcttgtgcacccaatgatgggctacgtaggattgggctgaagaagattaaattggaccctaaaaacaggcttgctgctcgaattgggtccaaggatgctgattcttttcgggcttccattagaaagtttcatctccaaaacaattttggtggcaccgaggaaacagatattgttgcgttaaagaattacttggacgctcaatactatggggaaatagccattggaacatcccctcagaagttcaccgtcattttcgatactggcagctctaatttgtgggtgccatcatctaaatgtaccttctcggttgcatgctacttccatgctaaatataagtctcgaaagtcaagtacttacagaaaaaatgggactactgctgcaattcaatatggtacaggagcaatttcaggtttctttagctacgacagtgtcagagttggtgacatagttgtaaagaaccaggaatttattgaagcaactagggagcctggtgttacatttttggcagccaagttcgatggcatactgggacttggatttcaagagatatcagttggaaatgctgttccagtgtggtacaacatggtcgaacaaggtcttatcaaggaaccgatattttcattttggctcaaccacaaaccagaggaagaggaagggggtgagattgtttttggtggtgttgatcctgcgcactacaagggaaagcacacttatgtgccggtgaccagaaaaggatattgggagtttgatatgggagatgtacttattggcgggaaacccactggatattgtgctggtggctgttctgcaattgctgactcagggacttctttgttggcaggtccaacgactgtaataaccatgataaaccatgcaattggagcatctggagttgtgagccaagaatgcaagaccattgttgcagagtatggacaaacaatattggatttgcttttggctgaaacacagccgaagaagatctgttcccaaattggattgtgcacctttgatggaactcgtggtgttgatgtgggtattgagagtgttgtggacgagaatgaaaaaaaatcatctggtggtcttcatggtggtgcttgttctgcatgtgaaatggctgttgtttggatgcagaaccagctgagccgaaatcagacacaagatcagatactaagctacattaatcaactttgtgataaaatgcctagcccaatgggagaatcggctgtagactgtgggaatatcccttcattaccggtagtgtcctttactatcggtggaagaactttagaccttcacccagaggagggtagcaatggggagttgcatgatttatatgctcgtatgttccgttgtccttattcagtttctatttggcttattcagtacatactcaaggtgggtgaaggtcctgtggcgcagtgcattagtggcttcactgctatagatattccacccccacgtggtcctctctggatccttggtgatgtcttcatgggacgttatcatacagtatttgattttggtaaacttagagtgggatttgctgatgcagcatag 1611 0.0 MNAMAWCLFVLTLLLSVVSCAPNDGLRRIGLKKIKLDPKNRLAARIGSKDADSFRASIRKFHLQNNFGGTEETDIVALKNYLDAQYYGEIAIGTSPQKFTVIFDTGSSNLWVPSSKCTFSVACYFHAKYKSRKSSTYRKNGTTAAIQYGTGAISGFFSYDSVRVGDIVVKNQEFIEATREPGVTFLAAKFDGILGLGFQEISVGNAVPVWYNMVEQGLIKEPIFSFWLNHKPEEEEGGEIVFGGVDPAHYKGKHTYVPVTRKGYWEFDMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQECKTIVAEYGQTILDLLLAETQPKKICSQIGLCTFDGTRGVDVGIESVVDENEKKSSGGLHGGACSACEMAVVWMQNQLSRNQTQDQILSYINQLCDKMPSPMGESAVDCGNIPSLPVVSFTIGGRTLDLHPEEGSNGELHDLYARMFRCPYSVSIWLIQYILKVGEGPVAQCISGFTAIDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGFADAA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04389 536 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Pste6g04389 536 Pfam Saposin-like type B, region 1 383 419 IPR007856 GO:0006629
Pste6g04389 536 SUPERFAMILY Acid proteases 10 535 IPR021109 -
Pste6g04389 536 Gene3D Acid Proteases 27 244 IPR021109 -
Pste6g04389 536 Gene3D Acid Proteases 479 536 IPR021109 -
Pste6g04389 536 Pfam Saposin-like type B, region 2 319 352 IPR008138 -
Pste6g04389 536 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 288 299 IPR001969 GO:0004190|GO:0006508
Pste6g04389 536 Pfam Eukaryotic aspartyl protease 475 534 IPR033121 -
Pste6g04389 536 ProSiteProfiles Saposin B type domain profile. 380 421 IPR008139 -
Pste6g04389 536 FunFam Lysosomal aspartic protease 72 314 - -
Pste6g04389 536 CDD phytepsin 76 534 IPR033869 GO:0004190
Pste6g04389 536 Gene3D - 316 419 - -
Pste6g04389 536 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 12 533 IPR001461 GO:0004190|GO:0006508
Pste6g04389 536 Gene3D Acid Proteases 245 453 IPR021109 -
Pste6g04389 536 SUPERFAMILY Saposin 317 419 IPR011001 -
Pste6g04389 536 Pfam Eukaryotic aspartyl protease 85 453 IPR033121 -
Pste6g04389 536 PRINTS Pepsin (A1) aspartic protease family signature 238 251 IPR001461 GO:0004190|GO:0006508
Pste6g04389 536 PRINTS Pepsin (A1) aspartic protease family signature 509 524 IPR001461 GO:0004190|GO:0006508
Pste6g04389 536 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Pste6g04389 536 ProSiteProfiles Saposin B type domain profile. 316 356 IPR008139 -
Pste6g04389 536 ProSiteProfiles Peptidase family A1 domain profile. 86 533 IPR033121 -
Pste6g04389 536 FunFam Aspartic proteinase A1 316 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04389 Pste-Chr6 33159059 33165952 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04389 6 33159059 33165952 Pste6g04389 6 33159059 33165952 ECH
Pste2g02575 2 25979720 25983974 Pste6g04389 6 33159059 33165952 ECH