Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02575 ATGAACAGGTCCATTAACATGGGAAACATGTCTAATGTCATCGTGTTCTGCACCCTGTTGTTTTCTCTGGTGTCAAGCGCACCCAGCGATGGTTTGAGCAGGATTGGACTGAAAAAGATCAAATTGGACACCGATGACGTTATGGGGTTTAAGGATTTGAGCTCTTCCATCAAAAAGTATCATCTTCAGAACATCCTTGGAGGCGCTGGGGACACAGATATTGTTGCGCTCAAGAATTACTTGGATGCTCAGTACTATGGTGAAATAGCCATTGGTACCCCTCCTCAGAGGTTCACTGTGATTTTTGACACCGGTAGCTCTAATTTGTGGGTGCCATCATCCAAATGTTACTTCTCGATTGCATGTTACACCCACGCTAGGTACAGGTCTAGCCAATCCAGTACCTACAGAGAAAATGGGACTTCTGCTGCAATTCAATATGGTACTGGAGCAATTTCTGGTTTCTTTAGCAATGACAATGTCAGAGTTGGCGCCATAGTTATAAAGGACCAGCAATTTATTGAAGCAACTAGAGAACCTGGAGTTACATTTGTGGCAGCTAAGTTCGATGGTATACTAGGTCTGGGATTTCAGGAGATATCAGTTGGTTATGCTGTTCCACTGTGGTACAACATGGTTGAGCAAGGTATTGTAAAGGATCCAATATTTTCATTTTGGCTGAATCGTAAACCAGAAGAAGAGAATGGCGGTGAGCTTGTTTTTGGTGGTGCTGATCCTGCTCACTACAATGGGAAACATACTTATGTACCAGTGACACGAAAAGGATATTGGCAGTTTGACATGGGAGATGTGCTCATTGCTGGTAAACCCACTGGATACTGTGCTAATGACTGTTCAGCAATTGCAGACTCTGGAACTTCTTTGTTGGCTGGCCCAACGACTGTAATTACTATGATAAACAACGCAATTGGAGCATCTGGAGTTGTAAGCAAGGAATGTAGATCTGTTGTTGAACAATATGGACAAACAATCTTGGAATTGCTCTTGGCTGAAGCAAAGCCAAAAATGATATGCTCACAAATTGGATTATGTACCTTTGATGGGACGCATGGTGTTGGTATGGCTATTGAGAGTGTGGTGGATAAGAAAGAAAGAGAATCATCTGGTGGCATTCGGGACGCTACTTGTTCTACATGTGAGATGGCTGTTATTTGGATGCAGAACCAGCTAAGGCAGAATCAGACACAAGATCAAATAATAGACTATGCCAATGGGCTTTGTGACAAATTGCCAAGCCCAATGGGACAATCATCCGTTGACTGTGGAAAGCTTTCTTCAATGCCTATTGTTTCCTTCACTATTGGTGGAAAAGTTTTTGACCTTTCCCCAGAGGATTATATACTGAAGGTGGGCGAAGGTCCTCAAGCTCAATGCATTAGTGGTTTTACTGCTTTGGATGTTCCTCCTCCTCGTGGGCCTCTATGGATCCTTGGAGATGTCTTCATGGGGCGTTATCACACCATCTTTGATTATGGTAATCTGAGAGTTGGATTTGCTGAAGCAGCATAGAGAATGTTCTTGTCTCGCAGAATGGCAAC 1559 0.433 MNRSINMGNMSNVIVFCTLLFSLVSSAPSDGLSRIGLKKIKLDTDDVMGFKDLSSSIKKYHLQNILGGAGDTDIVALKNYLDAQYYGEIAIGTPPQRFTVIFDTGSSNLWVPSSKCYFSIACYTHARYRSSQSSTYRENGTSAAIQYGTGAISGFFSNDNVRVGAIVIKDQQFIEATREPGVTFVAAKFDGILGLGFQEISVGYAVPLWYNMVEQGIVKDPIFSFWLNRKPEEENGGELVFGGADPAHYNGKHTYVPVTRKGYWQFDMGDVLIAGKPTGYCANDCSAIADSGTSLLAGPTTVITMINNAIGASGVVSKECRSVVEQYGQTILELLLAEAKPKMICSQIGLCTFDGTHGVGMAIESVVDKKERESSGGIRDATCSTCEMAVIWMQNQLRQNQTQDQIIDYANGLCDKLPSPMGQSSVDCGKLSSMPIVSFTIGGKVFDLSPEDYILKVGEGPQAQCISGFTALDVPPPRGPLWILGDVFMGRYHTIFDYGNLRVGFAEAA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02575 509 SMART sapb_4 279 351 IPR008139 -
Pste2g02575 509 SMART sapb_4 381 465 IPR008139 -
Pste2g02575 509 ProSiteProfiles Saposin B type domain profile. 379 420 IPR008139 -
Pste2g02575 509 Pfam Saposin-like type B, region 1 382 418 IPR007856 GO:0006629
Pste2g02575 509 FunFam Vacuolar aspartic proteinase 382 508 - -
Pste2g02575 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Pste2g02575 509 FunFam Aspartic proteinase A1 315 418 - -
Pste2g02575 509 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 25 507 IPR001461 GO:0004190|GO:0006508
Pste2g02575 509 SUPERFAMILY Saposin 316 418 IPR011001 -
Pste2g02575 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 287 298 IPR001969 GO:0004190|GO:0006508
Pste2g02575 509 FunFam Lysosomal aspartic protease 71 313 - -
Pste2g02575 509 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Pste2g02575 509 PRINTS Pepsin (A1) aspartic protease family signature 287 298 IPR001461 GO:0004190|GO:0006508
Pste2g02575 509 PRINTS Pepsin (A1) aspartic protease family signature 482 497 IPR001461 GO:0004190|GO:0006508
Pste2g02575 509 PRINTS Pepsin (A1) aspartic protease family signature 237 250 IPR001461 GO:0004190|GO:0006508
Pste2g02575 509 ProSiteProfiles Peptidase family A1 domain profile. 85 506 IPR033121 -
Pste2g02575 509 ProSiteProfiles Saposin B type domain profile. 315 355 IPR008139 -
Pste2g02575 509 Pfam Saposin-like type B, region 2 318 351 IPR008138 -
Pste2g02575 509 Gene3D Acid Proteases 245 509 IPR021109 -
Pste2g02575 509 Pfam Eukaryotic aspartyl protease 84 508 IPR033121 -
Pste2g02575 509 CDD phytepsin 75 507 IPR033869 GO:0004190
Pste2g02575 509 Gene3D - 315 418 - -
Pste2g02575 509 Gene3D Acid Proteases 33 243 IPR021109 -
Pste2g02575 509 SUPERFAMILY Acid proteases 31 508 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02575 Pste-Chr2 25979720 25983974 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02575 2 25979720 25983974 Pste2g02575 2 25979720 25983974 ECH
Pste2g02575 2 25979720 25983974 Pste6g04389 6 33159059 33165952 ECH