Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04154 atgtcaatgagtgagaggaagaccattgacctagagcagggatgggatttcatgcagaagggcatcaccaagctcaagaacattctcgaagccttgcccgagcctcaattcagctccgaggactacatgatgctttatacgaccatctacaatatgtgcacccaaaagccccctcatgactattcccaacaactttatgataagtacagggagtcttttgaagagtacatcgtttcaacggtattgccttctttgagagagaagcatgatgaatttatgttgagagaacttgtgaagagatgggcaaaccataaaattatggttcggtggctttctcggttctttcactatttggatcggtactttattgctcggaggtcacttccgccccttaatgaagttgggttgacttgcttccgtgatttggtttacaaggaactaaatggtaaagttagagatgcagttatttcacttattgatcaagaacgtgagggagagcagattgatcgagctctgttaaagaatgtattagacatatttgttgaaattggaatggggcaaatggatcactatgagaatgattttgaatctgccatgctcaaagacacttctgcttattattctcgtaaggcttcaaattggatcctagaagattcttgtcctgattatatgctcaaggctgaggagtgcttaaaacgggagaaagatagggttgctcattacttgcactctagtaattgtactgacctcgactttatcccagatgcattggcccatgtctttgtcctagatgcacgagtcccgtttgtacctgttgcactagttctaactagctcggaagagcaggagtcgtgccgccattcacaacaaaaaatgtacaaatgtgttgcaaatcgcggcgcctcccctgcgtgccaaaaagttcaaaatgagctgttatctgtgtatgcaaatcaactccttgagaaagaacactccggatgtcatgctttacttagagatgacaaggttgaagacttgtcaagaatgttcaggctattctctaaaatacctcgaggcttagatcctgtttccagtatatttaagcagcatgtgaccactgaaggtatggcattggtgaagcaggctgaagatgcagctagcaacaagaaggcagaaaaaaaggatattgttggtttttgttcggaagtgattgagctgcatgacaagtacctggcatatgtgaatgattgtttccagaatcatactcttttccacaaggctcttaaagaggcttttgaggtcttttgcaacaaaggtgttgctggaagttctagtgcagaactgcttgcctccttctgtgataacattcttaagaaaggaggaagtgaaaaattaagtgatgaagcaattgaagaaactcttgaaaaggtggtcaagctgctcgcctatattagtgataaagatttgtttgctgaattctataggaagaagcttgctcgaaggcttctctttgacaagagtgctaatgatgatcatgagcgaagtattttgacaaaattgaagcaacaatgtggtggacagtttacctcaaagatggaaggaatggttacggatttgacactggcaaaggagaatcaaactagctttgaggagtatttaagcaataatcccaatgcagaccctggcatagacttgaccgttactgttctgactacaggcttctggcctagttacaaatcttttgatctaaatcttcctgcagaaatgattaggtgtgttgaagttttcaaagaattttatcaaactaaaacaaagcacagaaaacttacatggatttattccttgggtacctgtaatataagtgggaaatttgagccaaaaaccgtggagctgattgttacaacctaccaggcttcagcattgctgcttttcaattcctcggatagacttagttactcagagataatgtctcagttaaacttatcagacgatgatgttattagactgctccattccttgtcgtgtgccaagtacaagattcttaacaaggagccaaatacaaaaacaattttgtcctctgattattttgagtttaattctaaatttactgacaaaatgaggagaatcaagattcctcttcctcctgtggatgagaagaaaaaagtaattgaggatgttgacaaggacagaagatatgctattgatgcctcaattgtgcgtattatgaagagtcggaaagttttgggctaccaacaattagtcatggagtgtgttgagcagttgggtcgcatgtttaagcctgacgtcaaggcaattaaaaagcggattgaagatttgatttctcgagactacttggaaagagacaaggataatgctaatatgttcaagtacttggcttga 2382 0.0 MSMSERKTIDLEQGWDFMQKGITKLKNILEALPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDHYENDFESAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAHYLHSSNCTDLDFIPDALAHVFVLDARVPFVPVALVLTSSEEQESCRHSQQKMYKCVANRGASPACQKVQNELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGLDPVSSIFKQHVTTEGMALVKQAEDAASNKKAEKKDIVGFCSEVIELHDKYLAYVNDCFQNHTLFHKALKEAFEVFCNKGVAGSSSAELLASFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSNNPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMIRCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTVELIVTTYQASALLLFNSSDRLSYSEIMSQLNLSDDDVIRLLHSLSCAKYKILNKEPNTKTILSSDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANMFKYLA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04154 793 FunFam Cullin-1, putative 321 438 - -
Pste6g04154 793 FunFam Cullin-1 like 439 552 - -
Pste6g04154 793 FunFam Cullin-1 like 556 709 - -
Pste6g04154 793 Pfam Cullin protein neddylation domain 723 785 IPR019559 -
Pste6g04154 793 Gene3D Cullin; Chain C, Domain 2 556 709 - -
Pste6g04154 793 SUPERFAMILY Cullin repeat-like 301 433 IPR016159 -
Pste6g04154 793 FunFam Cullin-1, putative 142 255 - -
Pste6g04154 793 ProSiteProfiles Cullin family profile. 438 668 IPR016158 -
Pste6g04154 793 FunFam Cullin-1 710 793 - -
Pste6g04154 793 Pfam Cullin family 24 246 IPR001373 GO:0006511|GO:0031625
Pste6g04154 793 Pfam Cullin family 290 696 IPR001373 GO:0006511|GO:0031625
Pste6g04154 793 SUPERFAMILY "Winged helix" DNA-binding domain 708 793 IPR036390 -
Pste6g04154 793 PANTHER CULLIN 9 789 IPR045093 -
Pste6g04154 793 Gene3D - 710 793 IPR036388 -
Pste6g04154 793 SMART cul_2 469 618 IPR016158 -
Pste6g04154 793 Gene3D Cullin Repeats 439 552 - -
Pste6g04154 793 SMART Cullin_Nedd8_2 720 787 IPR019559 -
Pste6g04154 793 Gene3D Cullin Repeats 5 141 - -
Pste6g04154 793 SUPERFAMILY Cullin repeat-like 11 247 IPR016159 -
Pste6g04154 793 FunFam Cullin-1, putative 5 141 - -
Pste6g04154 793 Gene3D Cullin Repeats 321 438 - -
Pste6g04154 793 SUPERFAMILY Cullin homology domain 437 706 IPR036317 -
Pste6g04154 793 Gene3D Cullin Repeats 142 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04154 Pste-Chr6 30854599 30864783 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04154 6 30854599 30864783 Pste2g03205 2 31916629 31927080 PCT
Pste2g02341 2 23414523 23428486 Pste6g04154 6 30854599 30864783 PCT