Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02341 TTTGCTTTCTTCCTCTTTAGTTTGGGTGGCAACACAAACACAAACAGAAACGCAATGGTGTGTTGATCACTCTCTCTATTCTCTCTCTCTCCATTTGATGTCTCTCCCCACCAAACGGTCGGGCACCGCTGGTTCCTCCCCGTCGCCGCCACCCCTATGAAAAAGGCCAAGTCTCTCCTCCGACCCCCCTCCGACGACGCCGTTTTGGACCCTTCCTCCATGCCTCTCGACGACGATCTCCCCAATGCCCGCGCCGCCAATCTCGCCCGCAAGAAAGCCACCCCTCCCCAACCCGCCAAGAAGCTCCTCATCAAGCTCCACAAAGCTAAACCTACATTGCCTACAAATTTTGAGGAGGATACATGGGCAAAATTAAAGTCTGCCATTTGTGCTATTTTTTTGAAGCAACCTAACTCTTGTGACTTGGAGAAACTTTATCAGGCTGTGAATGATCTCTGCCTTTATAAAATGGGAGGAAATCTTTATCAACGGATTGAAAAGGAGTGTGAAGAACATATATCTGCAGCACTGCAGGCTTTGGTTGGTCAAAGTCCAGATTTGGTTGTTTTTTTGTCTCTAGTTGAGAGATGTTGGCAGGATCTCTGTGACCAAATGTTGATGATTCGTGGTATAGCCTTGTATCTGGATAGGACGTATGTGAAGCAAACAGCAAATGTACGGTCATTATGGGACATGGGCTTACAACTTTTCCGCAAACATCTTTCATTGTCTCCTGAAGTAGAACACAAGACTGTTACTGGTCTTCTACGAATGATTGAAAGTGAAAGAAAAGGTGAAGCAGTGGATAGAACTCTTCTAAACCATCTTTTGAAGATGTTCACAGCTCTGGGAATTTATGCAGAAAGCTTTGAGAAGCCATTCCTTGAATGCACATCTGAATTTTATGCTGCTGAAGGTGTTAAATACATGCAGCAATCAGATGTTCCAGATTACTTGAAACATGTGGAGATAAGATTGCAAGAAGAACATGAAAGATGTTTGATTTACTTGGATGCAAGTACACGGAAGCCTTTGATAGCTACAGCAGAAAAGCAACTTCTTGAACGCCATATACCTGCCATTCTTGATAAGGGCTTCGCAATGCTTATGGATGGGAATCGTATTGAAGATCTTCAGAGAATGTACTCACTTTTTTCAAGGGTCAATGCCCTTGAGTCATTGAGGCAGGCCATTAGTTCTTACATCAGGAGAACTGGTCAGGGCATTGTTTTGGATGAGGAGAAAGACAAAGATATGGTTTCATCTCTTTTGGAATTTAAGGCTTCTCTTGACACAACGTGGGAGGAAAGCTTTTCCAAGAATGAAGCATTCTGTAACACCATTAAAGATTCATTTGAGCATCTTATTAATCTTCGTCAGAACCGACCTGCAGAGTTGATTGCCAAGTTTTTGGATGAGAAACTTCGGGCAGGTAACAAAGGCACTTCAGAAGAAGAGTTGGAGGGTACACTTGATAAAGTCCTGGTTTTATTCAGGTTCATTCAGGGTAAGGATGTGTTTGAGGCATTTTATAAGAAAGATCTAGCAAAAAGACTGCTGTTAGGAAAGAGTGCTTCTATTGATGCAGAAAAATCTATGATCTCCAAGTTGAAGACTGAGTGCGGCAGCCAGTTCACAAACAAACTAGAAGGGATGTTTAAGGACATTGAATTATCAAAAGAAATAAACGAGTCCTTCAAACAGTCATCCCAGGCCAGGACAAAACTGCCATCAGGGATTGAAATGAGTGTTCACGTCTTGACAACTGGGTACTGGCCAACATATCCACCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTAAGCAAATATAGTGGAAGGCGTCTCATGTGGCAAAATTCATTAGGTCACTGTGTCTTAAAGGCAGAGTTTCCTAAAGGGAAAAAGGAGCTGGCTGTCTCCCTATTTCAGACTGTTGTTTTAATGTTATTCAACGATGCTGAAAGGCTAAGCTTTCAAGATATCAAGGACTCTACTGGTATTGAGGACAAAGAACTGAGAAGGACACTGCAATCACTTGCCTGTGGAAAAGTTCGTGTGTTACAAAAGTTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTACCGTATAAAGGTGAATGCAATTCAGCTGAAGGAGACAGTGGAGGAGAACACAAGCACCACTGAAAGAGTTTTCCAAGACCGTCAGTATCAGGTTGATGCTGCTATTGTGAGGATAATGAAGACAAGGAAAGTGCTTAGTCACACCCTTCTTATTACTGAACTCTTCCAACAGCTCAAATTCCCAATAAAACCAGCGGATTTGAAGAAAAGGATCGAAAGCCTGATTGACAGGGAGTATCTGGAGAGAGACAAGAACAACCCTCAAATATACAATTACCTGGCATAGTTTACATTACCTCGTTTCACATTTAAAAGTTTCTTTTCTTAAAAAAATGACCTGGGTAAAGCTCGATATTTACTCCTTTGTCATTGTCACATATGTACAGTAACAACGGATTCTCCCTACCCCCCACTATTTTTCTTTTCCTTTCATTTATGGACTACTGTACTGTAATTGTAAAGAATATTCTCCCCTTGAATTTCTTTTCATTTAGTTGAAAATTCAAAATTGTTCTCGAAAATGATCGAGAAATTAAAAAAGAATTGGTCTTTAAAAAGGCAGGTTTCTTCCCAATGACTGAGGTGATACCGTGATAGGTTTCTTTTCTCCTTTACATAACATTTTATGTTCCTCTACTTGTATAATTTGAAAATACCGG 2830 0.4117 MKKAKSLLRPPSDDAVLDPSSMPLDDDLPNARAANLARKKATPPQPAKKLLIKLHKAKPTLPTNFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLYKMGGNLYQRIEKECEEHISAALQALVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERKGEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEEHERCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFAMLMDGNRIEDLQRMYSLFSRVNALESLRQAISSYIRRTGQGIVLDEEKDKDMVSSLLEFKASLDTTWEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAERLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02341 766 ProSitePatterns Cullin family signature. 739 766 IPR016157 GO:0006511|GO:0031461|GO:0031625
Pste2g02341 766 Gene3D Cullin Repeats 57 188 - -
Pste2g02341 766 SMART cul_2 440 589 IPR016158 -
Pste2g02341 766 FunFam Cullin 4B 693 766 - -
Pste2g02341 766 Pfam Cullin protein neddylation domain 698 758 IPR019559 -
Pste2g02341 766 FunFam Cullin-4 like 409 520 - -
Pste2g02341 766 FunFam Cullin-4 like 525 681 - -
Pste2g02341 766 SUPERFAMILY Cullin repeat-like 64 406 IPR016159 -
Pste2g02341 766 Gene3D Cullin Repeats 307 408 - -
Pste2g02341 766 Gene3D Cullin; Chain C, Domain 2 525 680 - -
Pste2g02341 766 PANTHER CULLIN 66 762 IPR045093 -
Pste2g02341 766 FunFam Cullin 4B 307 408 - -
Pste2g02341 766 SMART Cullin_Nedd8_2 695 760 IPR019559 -
Pste2g02341 766 SUPERFAMILY "Winged helix" DNA-binding domain 678 766 IPR036390 -
Pste2g02341 766 Gene3D Cullin Repeats 192 305 - -
Pste2g02341 766 FunFam Cullin-4 57 188 - -
Pste2g02341 766 SUPERFAMILY Cullin homology domain 407 677 IPR036317 -
Pste2g02341 766 Pfam Cullin family 70 667 IPR001373 GO:0006511|GO:0031625
Pste2g02341 766 MobiDBLite consensus disorder prediction 1 45 - -
Pste2g02341 766 ProSiteProfiles Cullin family profile. 410 639 IPR016158 -
Pste2g02341 766 Gene3D Cullin Repeats 409 520 - -
Pste2g02341 766 FunFam Cullin 3 190 306 - -
Pste2g02341 766 Gene3D - 693 766 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02341 Pste-Chr2 23414523 23428486 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02341 2 23414523 23428486 Pste2g02341 2 23414523 23428486 ECH
Pste2g02341 2 23414523 23428486 Pste6g04154 6 30854599 30864783 PCT