Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03941 atgtacttcagcggtgatccttctacgcggaagcgtgtcgatttgggaggtcgcagttcaaaggaaagggaccggaagaaccttttagaacagacgagagttgaacgcaaccggcgcttgtggttgcgccagcagaactctgctgcactcaaaattcagataatttatatcggttttgtcaagaatgaatatgatacgagaagtgatgatgggtattctggttcggtgtctagagggagaaaagctgtcaagactgaacaatctaagttgcgagagcagttctataaagcctatggaaagcattgtcagaatgtggacaggaattcttttggtccagattctgatttcctctgccagttcctctatttctttaagccagaaaatattgatgattttttagttcttgtgcaaatatgccggttactttggtggtttgttcaggataatggttctgagttgagtgtatatgagtcactcaagcttttctctacattcaagttggtatcaaagcgggaacgatcctgctctaagactctaaagtcacagttggctatctgccactgtccgttgctgtctgaagccatccaccaccgtctgccagtggcgcatgagctccacgtgtcggccaaacaacctccgtttgccactgtttcaccttcgtgggagtcgcttgagtgtgctgagtctgttcctagtcttcgctttccagttcgagcaagttttgaacattttagcctaaatctctcttggtccccttccgctccttgttccagatttgaaatgtcttcctcgacctcctctagtatcagctcaggtcctggacaccatgagcatttagaaaaggaagaaaatactaagggatcagctgaacagagagtccaatggaagaagttggattttcaactttgtgctttctgtggcagcagttgtagaagagttgaagctatcctagaagctgactctatagaagaaatagggaaacaatttgataatctctttatggttatgattcttcgtgaggaagaggaggatgtggaaatagaggacgtggtggaagaggtaatagttctcaatgtactcattgcaaaaggatgggccacattcatgaaacatgttacttactgcatggttttccagacaagtttacacatgtatcaagatctgagaaacctgaagagaggaaattatctgaagaagagtatcaaggatacaagagtacttgaggaacgtggtacggatcaacaacttggcgtcggacatgaatcaaggggtatcgataagttgttagttaaatccatcaagtgtgtcttcctaggattctttcatcttaaaaaatgttacaaatgctattctcttaataccgagaggtattacatgtttgctaatgttaccttttttgaggatgctcccttctactcattctccatttccgactcgatttccatccaagaggtactgtccacttctacttttagtcctgaaatggtcatctctcctgacatattttctcaatctgatcatgcagatattcctccaactccaaatttcactaatattgatccttcaccctttggcactattcaaggcatgacacttgcagctagttccatcgtacctgatgactctcttggctcatgtttctctccatttgcttcttgtacaacaactcctaattcttcttttatggccgatgacaactcaatttggcctattgctctccgaaaagttgttcatcttcctcttgggaagagaactattggttgcagatggatctatgctattaaagttggtcttaatggtgaaattgaccgccttaaagcttgtcttgtagccaaaggttacagtaagatctatggacttgattatggagatactttctcaccggtactcaagatcactaccatttgtcttctccttgccatggtggctatttgccattggctcctgtatcagatggatattaaaaatgcattccttcatgatgagttagatgaggagatttacatggagcaacttgttggttttgttcctcagggagagtctggtcttgtgtgtaaactttggcggtctttctatgggcttaaacagtctccaagggcttga 2103 0.0 MYFSGDPSTRKRVDLGGRSSKERDRKNLLEQTRVERNRRLWLRQQNSAALKIQIIYIGFVKNEYDTRSDDGYSGSVSRGRKAVKTEQSKLREQFYKAYGKHCQNVDRNSFGPDSDFLCQFLYFFKPENIDDFLVLVQICRLLWWFVQDNGSELSVYESLKLFSTFKLVSKRERSCSKTLKSQLAICHCPLLSEAIHHRLPVAHELHVSAKQPPFATVSPSWESLECAESVPSLRFPVRASFEHFSLNLSWSPSAPCSRFEMSSSTSSSISSGPGHHEHLEKEENTKGSAEQRVQWKKLDFQLCAFCGSSCRRVEAILEADSIEEIGKQFDNLFMVMILREEEEDVEIEDVVEEVIVLNVLIAKGWATFMKHVTYCMVFQTSLHMYQDLRNLKRGNYLKKSIKDTRVLEERGTDQQLGVGHESRGIDKLLVKSIKCVFLGFFHLKKCYKCYSLNTERYYMFANVTFFEDAPFYSFSISDSISIQEVLSTSTFSPEMVISPDIFSQSDHADIPPTPNFTNIDPSPFGTIQGMTLAASSIVPDDSLGSCFSPFASCTTTPNSSFMADDNSIWPIALRKVVHLPLGKRTIGCRWIYAIKVGLNGEIDRLKACLVAKGYSKIYGLDYGDTFSPVLKITTICLLLAMVAICHWLLYQMDIKNAFLHDELDEEIYMEQLVGFVPQGESGLVCKLWRSFYGLKQSPRA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03941 700 MobiDBLite consensus disorder prediction 1 29 - -
Pste6g03941 700 SUPERFAMILY DNA/RNA polymerases 577 699 IPR043502 -
Pste6g03941 700 PANTHER GAG-POL-RELATED RETROTRANSPOSON 575 700 - -
Pste6g03941 700 MobiDBLite consensus disorder prediction 264 287 - -
Pste6g03941 700 MobiDBLite consensus disorder prediction 11 29 - -
Pste6g03941 700 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 575 699 IPR013103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03941 Pste-Chr6 28604859 28612059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03941 575 699 Receptor kinase-like Gene Family AT4G23160 49.612 1.26e-30 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03941 6 28604859 28612059 Pste6g03941 6 28604859 28612059 ECH
Pste6g03941 6 28604859 28612059 Pste2g02972 2 29651395 29688797 PCT