Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03934 atgaagtggtatggtggcttgttgataatggctctgggtatgatgttgtttgtcctatacaacctcaaaggaattcagccacagaagcaatcatcaaaacagtcagcatacgatttcttcaataaccatacaccagatgattctattgacagaagcagcaatccccgagtaaactcttctgaggtggaactaaaaagggtactaactccaacaaaaaggccatctttgatacatgttgcaggacttgatgatctatatgacatgaaaaatttgtctaaaggtttgtctagaggagagatgaatgctgtgcttatttgggattccttacattccttgctgtcaaggtcagatgctttggctgaaacagctcaaggagttaaagaggcttctgttgcgtggaaagagttgctgtccactgttgaaaaggacaaagattctaagattaataagatggatggcctagaaaatcgaaactgcccattctctgtgacctcacctggtaaggctgtaccagatagtggaatcactctagatcttccatgtggtctggttgtagattcttcaattacactcattgcaatccctaatggacaaaacagaagcttccagattgaccttgctgctcaagagctagaaggggagctaaatcctccaattatcttgcattataatgtgaatcttcctggagtaaatatgacagaggaaccatatattatacaaaatacatggactagtgatttagggtggggaaaagaggaaaggtgtcctgctcgtggttctgccaacacccaagaagttgatggacttgttctctgcaatgtacaagctgtcagaagtaacaatgaagggaatgtaagtgtcaatgaacctgctagtgatataccttataatatttcctcagaaagtgcgcatagaactgctaatttcccttttgctgagggcaatcctttcacttccacaatgtgggttggttcagaggggtttcacatgactgtgaatggaaggcatgaaacatcttttgcatatagagagaagcttgaaccatggttagtcagcagtattaaagtggcgggaagtttaaatctcttatcaatcctggctaaaggtttacctgttactgaagataatgatatagtcgttgatgttgagaatctaaaggctccttctatctccagaaaaaggcttgttttgttgattggagtattctctactggaaacaactttgagcgtcgcatggccctgaggaggtcttggatgcaatatgaggttgtacgctctggagaagttgcggtccgatttttcattgggcttcacaagaacaatagggtcaattttgagttatggactgaagctcaagcatatggagatattcaattaatgccttttgtggattattatagtctgatttctttgaagacaattgcaatttgcattatggggcctgatagaatggtgttgagttttattagtcttttgcaggtgcctcagtctgcacctcagatgcaggttggcaatcagagtgggaacaatcctgccctgctgttttccatcgctgatgtcaaagatcgtgttgcaggccatttgattggcatcaaacatgaattgcaaggtcttgactatttggagaccagtccatatgtgtcctattttgcttctatgtctccaatgcttttgcatgattgtttgggtcatccaagtctagcaaagttaaagataatggttcccagtctcaaacaagttcagaagttagaatgtcttgacaagttgtcagcatgtgctatcaaatacatttttctttgtctacctcacttgactgtgtttcctagtgttgcccacacccccccaccagtcaaagtagctcttgttacagagaccattgtttcatctcctgttccatctcaagtctacatggagcagccgcttagatttgttgctcagggaatctacagggtaatgacaataggggtatccaggaccttaaaaatcatttgtttcagcattttaaaccaaaggaaatatgctcttgatatcttggcagatgctggaacgttaaattgtaagcccatcaatactcatatggatccaaataccaaacttttgcttgatgacggggaactcttcttggatcctgattgggctggttctgaaagtaatcgtcaatcaacctcagggtattgtatcttaattggagggaatcttatctcttggaagagcaaaaaggaaagtactgtgtccaagtctaatgtagaagcggaatatcgagtcatggcctttactacatacgatgatgcatttgttaggattgatgaagtactttccagccttaaaggaaagccatccaacggtctcttgtacggtctcatatcttctaaatcatctcctcagagggatgaaggcagcaagtggtacatcagtgaggaggaatggccacatgatacatacccaccatgggcacatggtcctggctatgttatctctcgagacgtagcaaaattcattgtcaatggccaccaagaaagaaaactcaagctctttaaattagaggatgttgccatgggcatatggattgaacagttcaaaaatggtggtaaagaagtgcattatgagaatgacgagaggttttacaatgctggatgtgaatcaaattatgtacttgcccactatcaaagcccaaggatggtgctatgcctctgggaaaagttgcagaaagagcaccagcctgtatgttgtgaatag 2736 0.0 MKWYGGLLIMALGMMLFVLYNLKGIQPQKQSSKQSAYDFFNNHTPDDSIDRSSNPRVNSSEVELKRVLTPTKRPSLIHVAGLDDLYDMKNLSKGLSRGEMNAVLIWDSLHSLLSRSDALAETAQGVKEASVAWKELLSTVEKDKDSKINKMDGLENRNCPFSVTSPGKAVPDSGITLDLPCGLVVDSSITLIAIPNGQNRSFQIDLAAQELEGELNPPIILHYNVNLPGVNMTEEPYIIQNTWTSDLGWGKEERCPARGSANTQEVDGLVLCNVQAVRSNNEGNVSVNEPASDIPYNISSESAHRTANFPFAEGNPFTSTMWVGSEGFHMTVNGRHETSFAYREKLEPWLVSSIKVAGSLNLLSILAKGLPVTEDNDIVVDVENLKAPSISRKRLVLLIGVFSTGNNFERRMALRRSWMQYEVVRSGEVAVRFFIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGPDRMVLSFISLLQVPQSAPQMQVGNQSGNNPALLFSIADVKDRVAGHLIGIKHELQGLDYLETSPYVSYFASMSPMLLHDCLGHPSLAKLKIMVPSLKQVQKLECLDKLSACAIKYIFLCLPHLTVFPSVAHTPPPVKVALVTETIVSSPVPSQVYMEQPLRFVAQGIYRVMTIGVSRTLKIICFSILNQRKYALDILADAGTLNCKPINTHMDPNTKLLLDDGELFLDPDWAGSESNRQSTSGYCILIGGNLISWKSKKESTVSKSNVEAEYRVMAFTTYDDAFVRIDEVLSSLKGKPSNGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPPWAHGPGYVISRDVAKFIVNGHQERKLKLFKLEDVAMGIWIEQFKNGGKEVHYENDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKEHQPVCCE 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03934 911 SUPERFAMILY Concanavalin A-like lectins/glucanases 176 368 IPR013320 -
Pste6g03934 911 Gene3D - 169 366 - -
Pste6g03934 911 Coils Coil 137 157 - -
Pste6g03934 911 SMART Gal_bind_lectin_2 179 367 IPR001079 GO:0030246
Pste6g03934 911 Pfam Galactoside-binding lectin 176 366 IPR001079 GO:0030246
Pste6g03934 911 CDD RNase_HI_RT_Ty1 709 760 - -
Pste6g03934 911 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 175 368 IPR001079 GO:0030246
Pste6g03934 911 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 757 863 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste6g03934 911 Pfam Galactosyltransferase 760 859 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste6g03934 911 Pfam Galactosyltransferase 409 476 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste6g03934 911 CDD GLECT 176 365 IPR001079 GO:0030246
Pste6g03934 911 Gene3D - 757 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03934 Pste-Chr6 28524729 28533638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03934 760 911 Glycosyltransferase AT3G06440 69.079 2.37e-71 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03934 6 28524729 28533638 Pste6g03934 6 28524729 28533638 ECH
Pste6g03934 6 28524729 28533638 Pste1g01258 1 4027174 4033592 PCT