Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01258 GAAGGAACCTGGCACACGGAGAAGAAGAAAGACGAAGAAGACATAGAAAAACAGCGAAATTTCACTTTGAAACAGGAAAACAAACCACATACTTGAACAAAAACCCTCTCTCTCTTCTCTCTCGCTCTACATTTTCCGCCATTTTCCCGAGAAAATCTTGCAGGATTGCAGGTCCAGCATGCTGGCTAAATCTCACATGCTTTCCAAGTAATTATCATGGTGGATGTCTATGCTTCCAAGGGCTGATAGTTGGTATAGATATTTGATTATCAGTTACATAGAAGACTAAAAGAAAGAAGTAAATCTTGAACTGCTATTCAGTGAAAGTTTTCCTACAGATGTTTCTTTGAATTGATAAGAAGAATTTATACTATCCGCATCCCTCATTTTGTTCTATGTTTGTTTGCTCCGTAATTGTGGCAAGGAGTTGAATGAAAGATAACGACTAATTTGGTAGTAGTTTAGCATCCTTATGATCTAGTACCATGAAGATTCAGGACTATTGGCTCATTCATAGGATCATCAAAATGAAAAGGTTGTACGGAGGAGTTCTGGTTGCCTCACTGTTTATGCTGTTTATGCTTACAATCCTGCGATATGGGGTCATGAAAAATCCTATTGGTGAAGGTTATCTGACTATACCTGTTCTCATTAATGGTACTAATCCTCTAGAATGGATAAATCCCACAGTGCCACCTGCTATTAAAAATCCAGATGGTCCTTCTCAAGTTATTTCTTCTGACATTTTAGTATCTAGCCTCTTTACTGGGGGCAACTTTTCCAAAGAAGAACAACAAGCTCTGCAGACATGGAACCAATTGAACCACTTAATTGATCACGTTCAGGGTTTGCCCAATGCTGCAGAAGCTATCAAGGAGGCTGCCAGTGCATGGAATAGTCTCATTTCCTCAATTGAAGAAGAAAAACAAGGTCATGCAAATGATAGTTCAAGAGCTAAAGAGAAACAGTGCCCCCATTTTCTTAATAAAATGAATTCCACTGAACTTGGTAATAGTAGTTACAAACTACAAGTACCTTGTGGTCTGACACAAGGTTCTTCCATCACTGTAATTGGTATTCCAAATGGTCTTCTAGGTAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCCGAACCTCCAATTATTTTACACTATAATGTTCGGCTTCATGGGGATAAAATCACTGAAGATCCAGTAATAGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCCCCTAACCCTGAAAAGGTTGAGAAAGTTGATGAATTGGAGCAGTGTAATAAGATTGTAGGGAAAAACATGAGCCAACTTCACACGGCTGGCATGCATTCCCACATTTCGAGACAATCTTCAACAACTGAAGAACTATCAATAAATAGGAAATATTTTCCTTTTAAGCAAGGTTATCCATTTGTTGCAACTCTTAGAGTGGGAACCGAGGGAATCCAGATGACAGTTGATGGAAAGTACATAACTTCATTTGCTTTCCGCGAAACTTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCAGGGGACCTCAAATTAATATCTATTCTTGCCAGTGGTCTACCTACATCAGAGGATTCAGAGCATATTATTGACCTAGAATCATTGAAATCAAGTCCTATATCTGCCCAGACCCCATTGGATCTTTTCATTGGTGTTTTTTCTACAGCTAACAATTTTAAGCGTAGAATGGCTGTCAGAAGAACCTGGATGCAGTACAATGCTGTTCGTTCAAATATAACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGTTGTGGAGAGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTATTATAGCCTGATCACCTGGAAATCTTTAGCAATCTGCATTTTTGGGACACAAGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCCTTTGTCAGGGTAGATGAAGTTCTAGATTCTTTGCATAGGATCAATGTTAATCATGGGTTACTATATGGACTCATCAATTCGGATTCCCGACCACATCGAAATACAGATAGCAAATGGTACATCAGCTCAGAGGAATGGAGCGAAGGAACATATCCTCCTTGGGCACATGGTCCCGGGTATGTAGTCTCACATGATATTGCAATGACGGTGTCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATAGCAGACATGAAGAAGGAAGGTGTAGAAGTTCGGTATGAAAATGAGGGCAGAGTCTATCCTGAGGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAAGGTCCTAGGGAGATGCTGTGTTTGTGGCAGAAACTTAAGGAAACAAAACGTGCAAAATGTTGTGGTGATTGACCAGGTTACACAACTTCTGAAAAAGAAAATATATACAAAAATCCCCCTTTTGATGAGTGGCTAGGGAAAATGTATAATGATTAGAATAGTTAGCTTAGAAATAGTTGATAGTAGGCCATATTCGTCACCATAAATTCGTTTAAGAAAATCTGATGAATATTGTTCTATGTAGATAGTGAGATTTGTATAGAGCCGCCAATCAGAAATAGGTATTAGATTTTCTGGCACCCAATCAAATTTTTTTTATTGTGAACGTCATTATAGAATCAAATTTTCTTAAGAGATTACATGTATCCTTCCCTCCCTTCCTTTCTTTTGCAGCCTACCTGACG 2767 0.3928 MKIQDYWLIHRIIKMKRLYGGVLVASLFMLFMLTILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPTVPPAIKNPDGPSQVISSDILVSSLFTGGNFSKEEQQALQTWNQLNHLIDHVQGLPNAAEAIKEAASAWNSLISSIEEEKQGHANDSSRAKEKQCPHFLNKMNSTELGNSSYKLQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPEPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPNPEKVEKVDELEQCNKIVGKNMSQLHTAGMHSHISRQSSTTEELSINRKYFPFKQGYPFVATLRVGTEGIQMTVDGKYITSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNITAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKSLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHRINVNHGLLYGLINSDSRPHRNTDSKWYISSEEWSEGTYPPWAHGPGYVVSHDIAMTVSKKFRENHLKMFKLEDVAMGIWIADMKKEGVEVRYENEGRVYPEGCKDGYVVAHYQGPREMLCLWQKLKETKRAKCCGD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01258 649 CDD GLECT 179 369 IPR001079 GO:0030246
Pste1g01258 649 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 179 372 IPR001079 GO:0030246
Pste1g01258 649 Pfam Galactoside-binding lectin 179 370 IPR001079 GO:0030246
Pste1g01258 649 Pfam Galactosyltransferase 414 597 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste1g01258 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 179 372 IPR013320 -
Pste1g01258 649 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 382 604 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste1g01258 649 SMART Gal_bind_lectin_2 183 371 IPR001079 GO:0030246
Pste1g01258 649 Gene3D - 170 370 - -
Pste1g01258 649 FunFam Beta-1,3-galactosyltransferase GALT1 393 621 - -
Pste1g01258 649 Gene3D - 392 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01258 Pste-Chr1 4027174 4033592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01258 15 647 Glycosyltransferase AT1G26810 64.330 0.0 852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01258 1 4027174 4033592 Pste1g01258 1 4027174 4033592 ECH
Pste6g03934 6 28524729 28533638 Pste1g01258 1 4027174 4033592 PCT