LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g03771	atgcgctcaggagtttgtgcattacagcagaccctcacagctgaggctgcttcagtgttgaagcactctctggggttggctcggaggaggggccatgcacaggtcactcctctgcatgtggctgccactttgctcagcctaagaggcagttccttgagaagggcttgtctcaagtctcagcctcaccaagcttctcatcctcttcaatgcagggctcttgagttgtgcttcaatgttgctctcaacaggctcccaacaacacctgctcctttgatccactctcagccctctctttccaatgctcttattgctgcattgaagagagctcaggctcaccagagaaggggctgcatagagcaacagcaacaacagcctcttctcgccatcaaggttgagctggaacagctcatcatatccattcttgatgaccctagtgttagcagggttatgagagaggctggtttctccagcactgctgttaagaacaacatagaggactcttctcctcattctgttctccactgttacaatagttctggtggtgtgttttcttctccttgttcaccttctgccagtgagagccatagggacacaaacaccaacccatccaattataggcagactcatcatttcttaacttcttatgcttctgagttccacccttcacttctgttttctccaccgaagcatgcaccactgtgttccataactgatgcagcttcctctagtaaggatgatatcaggcttgttctggatatcctcttgaggaagaagaaaaagaacattgtcattcttgatgactcagtgtcattaactgaaggtcttgtggaagagctaatgggaaggttagaaagatcagaagtgcctgatgagttaaagtcaacccattttatcaaatttcaattttcacctgtttcttttagttgcatgaaaagagatgatgttgaaatgaagctcttggaactcaaagcaaaggtggattccgttgtatcaggaggagggggtggaattttttatattggagacttgaagtggacagtggaggacacaagtttcagtgaaaaaaaagaaggatccccagatgcagaagtttcttattacaatccagttgatcatttagtttcagaaatagggaagttattctctcactctggaacctcgaataatactaaggtgtggctgatggccactgctagctatcaaacctacatgagatgtcaaatgaggcaagcccctcttgagaagcagtggactcttcaggctgttcctgttccttcaggtggacttggcttgagtcttcatgctcccaggagtgcgtacggtcactgggcgctatgccagaaccattgcggaaagcatggttgcgtccttgattcaaagatgaccgtctcccaaaacccatctcatgtgcctgaaacaaagctctttagtaacatggaacagcaggataagctcaactgttgtgaagaatgtgcctccaattatgaaaaagaagctcaatttctcggaccagaccacaagaaaatgttgcctttctggcttcagtctcataacacagaagaccataagaaggatgaattagtccagttgaaaagaaaatggaatagactatgccactgtctccaccaaagcaaacagcctcagaaccaatggaactggaacaacaacagttataattcaccaaactctatatcctttgtcaataatgccacacataactacacctccaaagtagtccctcgattcaggcgccaacaatcatgcattattgagttcaatttcggcaaaggcagcaaagcaacagagccagtcatggattcccttgagagcgtggaaggtaaagaagtaaagactacccttgcccttggcaatggcggttcaggtgagacggtgggggatataactgatacaacactgcaacgagctcatatttgtaaactattgcaggagaatgtgccatggcagtctgagactgttccttcaatagcagaagccttgattgattccaaatcagcaaagcaaaatagcaacattacttggttacttgtgcaaggcaatgacaccattgggaaaagaaggttggcacttgcagttgcagaatcagtgtttggctcaactgatgtgctccttcactttgacatgctaaagagagagacttcagtagccccattttctgaaatgctagcaggagcattgaaaacccacctgcagcttgtgatgctaatagaaaatgttgactttgctgattcccaattcaagaaattcctctctgatggatttgaaaagggaaagtttggaaattccacagaagagaagtcaaggcaagtaatattcatattgacaagtggtggatccactagcattgaggagcagaataagaacacggttatgaggttgttgtggcagatcagtgaaaccaagcctagcgtagagtcaccatatgtcataacaaggactatggagccttgtataggccacaagcgaagagctgaactggatttgttttctaacaccaagagttcccaagggaggaagaagaaagagtattcaagacaaacaagctttaacagtcttgatcttaacatgaaagctgatgaagagggtgaagtggagggtaaagcaggagaaagtagtcccatttcaagagatttgactggagaaactatagctgatccagtgaagcgaaatggctttattgagtcaattgagaaccggtttgagttgaacacaagtgcagttagggagagggagatggcagagttgtttttgtgtaagatgaatggatgttttgaggaggtttatgggaagaaatgtttggagaatttaagtgtagatgagagggtgattgaggatatgcgtgttgggtgtggttattttaccaacagtttgtttgagaaatggctgaaagaggtttttgaaagcagcttagaaagggttaactttggagggaaggagggaatagtttttagactttgttggggtggtaaaagaaatagaaattcggatagtggtttcatgagttcttctctgcccaagagtatccaacttaattacttcattgagtga	3066	0.0	MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSQPHQASHPLQCRALELCFNVALNRLPTTPAPLIHSQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLAIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSPHSVLHCYNSSGGVFSSPCSPSASESHRDTNTNPSNYRQTHHFLTSYASEFHPSLLFSPPKHAPLCSITDAASSSKDDIRLVLDILLRKKKKNIVILDDSVSLTEGLVEELMGRLERSEVPDELKSTHFIKFQFSPVSFSCMKRDDVEMKLLELKAKVDSVVSGGGGGIFYIGDLKWTVEDTSFSEKKEGSPDAEVSYYNPVDHLVSEIGKLFSHSGTSNNTKVWLMATASYQTYMRCQMRQAPLEKQWTLQAVPVPSGGLGLSLHAPRSAYGHWALCQNHCGKHGCVLDSKMTVSQNPSHVPETKLFSNMEQQDKLNCCEECASNYEKEAQFLGPDHKKMLPFWLQSHNTEDHKKDELVQLKRKWNRLCHCLHQSKQPQNQWNWNNNSYNSPNSISFVNNATHNYTSKVVPRFRRQQSCIIEFNFGKGSKATEPVMDSLESVEGKEVKTTLALGNGGSGETVGDITDTTLQRAHICKLLQENVPWQSETVPSIAEALIDSKSAKQNSNITWLLVQGNDTIGKRRLALAVAESVFGSTDVLLHFDMLKRETSVAPFSEMLAGALKTHLQLVMLIENVDFADSQFKKFLSDGFEKGKFGNSTEEKSRQVIFILTSGGSTSIEEQNKNTVMRLLWQISETKPSVESPYVITRTMEPCIGHKRRAELDLFSNTKSSQGRKKKEYSRQTSFNSLDLNMKADEEGEVEGKAGESSPISRDLTGETIADPVKRNGFIESIENRFELNTSAVREREMAELFLCKMNGCFEEVYGKKCLENLSVDERVIEDMRVGCGYFTNSLFEKWLKEVFESSLERVNFGGKEGIVFRLCWGGKRNRNSDSGFMSSSLPKSIQLNYFIE	1021

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g03771	1021	Gene3D	-	9	168	IPR036628	-
	Pste6g03771	1021	ProSiteProfiles	Clp repeat (R) domain profile.	8	170	IPR004176	-
	Pste6g03771	1021	SUPERFAMILY	Double Clp-N motif	12	165	IPR036628	-
	Pste6g03771	1021	PANTHER	CHAPERONE PROTEIN CLPD, CHLOROPLASTIC	1	988	-	-
	Pste6g03771	1021	Pfam	Clp amino terminal domain, pathogenicity island component	131	166	IPR004176	-
	Pste6g03771	1021	Pfam	Clp amino terminal domain, pathogenicity island component	26	53	IPR004176	-
	Pste6g03771	1021	Gene3D	-	610	824	IPR027417	-
	Pste6g03771	1021	FunFam	protein SUPPRESSOR OF MAX2 1	9	170	-	-
	Pste6g03771	1021	MobiDBLite	consensus disorder prediction	860	884	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g03771	Pste-Chr6	26812970	26817337	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste6g03771	6	26812970	26817337	Pste6g03771	6	26812970	26817337	ECH
	Pste6g03771	6	26812970	26817337	Pste2g01438	2	15650749	15655025	PCT