Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03680 atgggttcacgggtcctaatggagactttaccaaggccaattttttctaccctgctgctatttttctggctttctgcagtcactgcctctgtgacttatgatcacaaagccattgttgttaatgggcagagaagaattttgttctctggttctatccactacccaagaagcacacgggagatgtggccagaccttattcaaaaggccaaagatggaggcatagatgttatccaaacctatgtgttttggaatggacacgagccttctcctggaaagtattatttcgaggataggtacgacttggttaaatttatcaagctggtgcagcaagctggtctgtatgttcatctccgcattggtccttacatatgtgctgaatggaactttggtggatttcctgtttggctcaagtatattccgggtatttctttcagaacagacaatgaacctttcaaggcggcaatgcaaaattttactgagaagattgtccgcatgatgaaggcggagaatttgtttcagacgcagggaggtccgataattatgtcacaggcaaaaaacgaatatggaccggtggagtgggaaattggtgcgcctggaaaagcttataccaaatggtttgctcaaatggctgtgggtttagacactggtgtcccctggattatgtgcaagcaagaagatgctccggatcctattgttgttgcctttactgttgatattttggtggagattgacacctgcaatggatactactgcgaaaattatactcccaaccagatttacaaacccaaaatgtggacagagaactggactggctggttcactgagtttggtggtgcgatacctcgtagacctgcagcggacatggcattctcagttgcaagattcgtacagaatggtggttcatttgttaattactatatgtaccatggaggaactaattttgatcggatatccagtggcctcttcattgctaccagttatgactatgatgctcccattgatgaatacggacttctaaatgaaccaaaatgggggcatcttagagatttgcataaagcaataaagctatgtgagccagctttagtgtctgtagaccccacagtgacatggcctggaaataatcttgaggtccacgtgttcaacacttctggtgcttgtgcttcatttcttgcaaattatgacaccaattcttcagcaacagttacatttggaaatggaaactttgatctaccgccttggtctattagcatccttcctgactgcaaaactgcagttttcaacaccgcaaggtttggtgctcaaagctccctgatgacgatgacggctgtgagcagtgcatttgattggcattcacacaatgaagagcctgcatcttccaatgaaggcgattccttgacagcgtatgcactctgggagcagattaatgttacccgggattctacagattatttgtgtgtcagcattgatgcaaatgaacgttttataaacaaaggacaatctcctgttcttaccgtaatgtcagcaggtcatgttttgcatgttttcatcaacggtcaactttcaggtaccgtatacggaggattggactcttttaaattaacatttagtaatagtgttaatctgagggttggcaataacaggatttctttacttagtattgccgtgggtctccctaatattggtgtacactttgaaacatggaatgctggggtgttaggcccagtcacactaaatggtctaaatgagggcactagagacttgtccaaacagaaatggtcttacaaggttggtctctacggtgaagccttaaaccttaacactgaaagtggtagtacctccgttgaatggatacaaggatcatcattggctaaaaagcaacctttgacatggtacaagacaactttcaacaccccagctggcaatgatccattggctctagacatgattagcatgggaaagggtcaagtatggataaacggtcggagcattggacgccattggcctggatacatagcacacggtagctgtgatgattgttattatgctggaactcacactgagaaaaaatgccggacaaaatgtggagaaccctcccaaagatggtaccatattcctcgatcgtggctgaacccaaatgggagcaactatctggttgtgtttgaagaatggggaggtgacccaactggaatttctttggtgaaaagaacagtagcaagtgtttgtgctgatatatatgaaggacaaccaactctgaagaacaggcagatgcttgactctggcaaaattaatagacccaaggctcacttgtggtgtccacctgggcaaaagatctcccagattaaatttgctagttatggattgccacagggaagttgtggaaactttagagaaggaagttgccatgctcacaaatcatatgatgctcctcagaagaactgcgttggaaagcaatattgctcggtgacggtagctcctgaagtttttggaggagacccatgtccaggaattgcaaagaagctctcacttgaggcactatgcagctag 2544 0.0 MGSRVLMETLPRPIFSTLLLFFWLSAVTASVTYDHKAIVVNGQRRILFSGSIHYPRSTREMWPDLIQKAKDGGIDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKYIPGISFRTDNEPFKAAMQNFTEKIVRMMKAENLFQTQGGPIIMSQAKNEYGPVEWEIGAPGKAYTKWFAQMAVGLDTGVPWIMCKQEDAPDPIVVAFTVDILVEIDTCNGYYCENYTPNQIYKPKMWTENWTGWFTEFGGAIPRRPAADMAFSVARFVQNGGSFVNYYMYHGGTNFDRISSGLFIATSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGNNLEVHVFNTSGACASFLANYDTNSSATVTFGNGNFDLPPWSISILPDCKTAVFNTARFGAQSSLMTMTAVSSAFDWHSHNEEPASSNEGDSLTAYALWEQINVTRDSTDYLCVSIDANERFINKGQSPVLTVMSAGHVLHVFINGQLSGTVYGGLDSFKLTFSNSVNLRVGNNRISLLSIAVGLPNIGVHFETWNAGVLGPVTLNGLNEGTRDLSKQKWSYKVGLYGEALNLNTESGSTSVEWIQGSSLAKKQPLTWYKTTFNTPAGNDPLALDMISMGKGQVWINGRSIGRHWPGYIAHGSCDDCYYAGTHTEKKCRTKCGEPSQRWYHIPRSWLNPNGSNYLVVFEEWGGDPTGISLVKRTVASVCADIYEGQPTLKNRQMLDSGKINRPKAHLWCPPGQKISQIKFASYGLPQGSCGNFREGSCHAHKSYDAPQKNCVGKQYCSVTVAPEVFGGDPCPGIAKKLSLEALCS 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03680 847 PANTHER BETA-GALACTOSIDASE RELATED 26 751 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 FunFam Beta-galactosidase 26 357 - -
Pste6g03680 847 Gene3D Glycosidases 24 357 - -
Pste6g03680 847 Pfam Galactose binding lectin domain 769 846 IPR000922 GO:0030246
Pste6g03680 847 SUPERFAMILY Galactose-binding domain-like 591 751 IPR008979 -
Pste6g03680 847 Pfam Beta-sandwich domain in beta galactosidase 361 430 IPR041392 -
Pste6g03680 847 FunFam Beta-galactosidase 306 433 - -
Pste6g03680 847 SUPERFAMILY Galactose-binding domain-like 415 581 IPR008979 -
Pste6g03680 847 Gene3D - 599 742 - -
Pste6g03680 847 SUPERFAMILY (Trans)glycosidases 30 358 IPR017853 -
Pste6g03680 847 Gene3D - 758 847 IPR043159 -
Pste6g03680 847 FunFam Beta-galactosidase 758 847 - -
Pste6g03680 847 CDD Gal_Rha_Lectin_BGal 764 846 - -
Pste6g03680 847 Pfam Glycosyl hydrolases family 35 38 353 IPR031330 -
Pste6g03680 847 FunFam Beta-galactosidase 599 741 - -
Pste6g03680 847 ProSiteProfiles SUEL-type lectin domain profile. 761 847 IPR000922 GO:0030246
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 653 669 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 321 337 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 301 316 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 626 640 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Pste6g03680 847 PRINTS Glycosyl hydrolase family 35 signature 264 279 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03680 Pste-Chr6 26004382 26009778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03680 14 847 Glycoside Hydrolase AT3G13750 67.773 0.0 1194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03680 6 26004382 26009778 Pste6g03680 6 26004382 26009778 ECH
Pste6g03680 6 26004382 26009778 Pste2g01382 2 15144999 15151378 PCT