Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01382 TCCCACCCGAATTTTCAAGTTACAATTCCCAAAGCAGAAGCTAAAGTTGTCTTAACCGGCAATGTGTTGCAGTTGTTCCGTGTGAAGGATGAGTAGAAGGAAAAGGGGTCCCATTCTTCCCTCTTTTTCTTTCCTTCTCCAAATCTATATAAAGCAGCAACATTTGCATCAATGTTTCCCTCAACATACCCATCAAACCCACACTCCTCACCTCTCAAAAGGGTAAACAAATATATAAAAAGAAGGCACTGCCACAAACAAAAACTACCTTCAACCTTGTTCTCTCTTTTCATGTTTTACATGAGTAAACAAGAGTGAAGGGAAGAAACAAGAACACCATTGTGGGTTTGAGGAAGATTGCATAGCAATAGAGTTCAAATGGGGAAGAGAGAGTTTAATGGGGTGGTGTTTATGCTTTTGTGTTTGTGGGTTTGTGGTGTCACAGCCTCTGTGACTTATGACCACAAAGCCATTGTGATTGATGGCAAGAGAAGAATTTTGATCTCTGGCTCCATTCACTACCCGAGAAGCACACCCCAAATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCCTTGATGTCATTCAGACATATGTGTTTTGGAATGGTCATGAACCTTCTCCAGGAAAATACTATTTCGAAGATAGGTATGACTTGGTTAAGTTCGTGAAGCTCGTGAAGCAAGCTGGCCTTTATGTTCATCTCCGAATTGGTCCCTACATATGTGCTGAGTGGAACTTTGGGGGATTTCCCGTTTGGCTCAAGTATGTTCCTGGTATATCTTTCAGAACCGACAATGAGCCGTTCAAGGCGGCAATGCAAAAATTCACAGCTAAGATTGTTAGTTTGATGAAACAAGAGGGGCTGTTTCAATCACAGGGTGGTCCAATAATTATGTCGCAGATTGAAAACGAGTATGGACCGGTGGAATGGGAAATTGGTGCTCCTGGAAAAGCTTATACGAAATGGGCAGCTCAAATGGCTGTTGGTCTTGACACTGATGTTCCATGGGTTATGTGCAAGCAAGAAGATGCTCCTGATCCTGTTATTGACACCTGCAATGGGTTCTACTGTGAAAACTTCAAGCCGAACAAGAACACCAAACCCAAAATGTGGACTGAGAATTGGACTGGCTGGTACACTGATTTTGGTGGGGCAGTCCCTACTAGACCAGCGGAAGACTTGGCTTTCTCAGTTGCAAGATTCATACAGAATGGTGGTTCATTCGTTAACTACTATATGTACCATGGAGGAACTAACTTTGGCCGAACATCTGGTGGTCTCTTCATTGCAACTAGCTATGACTATGATGCACCCCTTGATGAATACGGACTTCAAAATGAACCAAAGTATGGGCATTTGAGAAATTTGCATAAAGCAATAAAACAATGTGAGCCGGCTTTGGTGTCTACTGATCCCAAAGTGACATCACTTGGATATAACCTTGAGGCACACGTGTTCTGGACCCCTAGTGCCTGTGCAGCATTCATTGCAAATTATGATACCAAATCTTCTGCAAAAGCAAAATTTTGGAATGGGCAATATGATCTACCACCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGAAGTTTTCAACACAGCAAAGGTTGGTGTCAACCGCTGGCTGAAAAAGATGACTCCTGTAAGCTCATTTGCATGGCAATCATTCAATGAGGAACCTGCCTCATCCAGTCAAGCTGATTCCCTTGCAGCAGAAGCACTTTGGGAGCAGGTCAACGTGACCCGAGATTCTTCAGATTATTTGTGGTATATGACAGATGTCTACATTAATGCTAATGAAGGTTTTTTAAAGAACGGGCAATCTCCTCTTCTTACTGTAATGTCAGCAGGCCATCTTCTCCATGTTTTCATTAATGGTCAACTTTCAGGAACTGTGTATGGGGGATTGGGGAATCCGAAATTAACATTCAGTGACAATGTGAAGCTGATGGCTGGCAATAACAAGATTTCTTTACTTAGTGTTGCCGTTGGTCTCCCGAATGTTGGTGTGCACTTTGAAACATGGAATGCGGGAGTGTTGGGCCCAGTCACTCTGAAGGGTCTAAATGAGGGGACACGAGACTTGTCCCGGCAGAAATGGTCTTACAAGGTTGGACTGAAAGGTGAATCCTTGAACCTTCACACTGAAAGTGGGAGTAGCTCTGTTGAATGGACACAAGGATCATTAGTGGTTAGAAAACAACCTTTGACATGGTACAAGACAACTTTTAACGCACCAGCAGGCAATGATCCATTGGCTCTGGATATGGGTAGCATGGGAAAGGGTGAAGTATGGATAAATGGTCGAAGCATTGGTCGCCATTGGCCTGGATATATAGCACATGGTAGTTGCGGTGCTTGCAATTATGCTGGATTTTATACTGATAACAAATGCAGGACAAATTGTGGACAACCATCTCAGAGATGGTATCATGTTCCTCGCGCATGGCTGAACTCAGGTGGTAACTCCTTGGTTGTGTTTGAAGAATGGGGAGGTGACCCCAATGGAATTGCTTTGGGCACCATTAACCAGCAACATATGTCTTATAACTACTGTCTAGGAAATACAAAGAAGCTCACAAGTGAGTCCTATGTGGTTAGGACCCTGTGATGCAGCAATAAGTGTCGTTCAGATCTTATTAGGTTCAGTATACAAAATATTTGAAGTTCATCATTGGTGCTCCATGTTTTCTGGTTGAAGTTTACCTCAAACATTTCCAAGGCCTAAACATGCACCGGCTGGTCAAAAACAGAAATGTATATAGAAGAAATTGGATGCAAAGACTGTGTATACTGTACATAGTCAGGTTATTGTGCTGAATATTGCTCCATTATATTACAGGGCTTGTATCAATGAATATTGAGTCCTTACACATTTATTTAATCTACTATATATACAAAGGAAAGAATTTGGACACGCAAAATGTGTCGGAGAGTACTGCTACATTCTGCCAAAAATAATTGTGTTTTTCCATTAAAATTATTATGTAAGAACATATTCAAAGTAATAAAAGTTGCTTCCTTTTGAATATTTATCTCA 3051 0.4189 MGKREFNGVVFMLLCLWVCGVTASVTYDHKAIVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFVKLVKQAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGISFRTDNEPFKAAMQKFTAKIVSLMKQEGLFQSQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTDVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKNTKPKMWTENWTGWYTDFGGAVPTRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTSGGLFIATSYDYDAPLDEYGLQNEPKYGHLRNLHKAIKQCEPALVSTDPKVTSLGYNLEAHVFWTPSACAAFIANYDTKSSAKAKFWNGQYDLPPWSISILPDCKTEVFNTAKVGVNRWLKKMTPVSSFAWQSFNEEPASSSQADSLAAEALWEQVNVTRDSSDYLWYMTDVYINANEGFLKNGQSPLLTVMSAGHLLHVFINGQLSGTVYGGLGNPKLTFSDNVKLMAGNNKISLLSVAVGLPNVGVHFETWNAGVLGPVTLKGLNEGTRDLSRQKWSYKVGLKGESLNLHTESGSSSVEWTQGSLVVRKQPLTWYKTTFNAPAGNDPLALDMGSMGKGEVWINGRSIGRHWPGYIAHGSCGACNYAGFYTDNKCRTNCGQPSQRWYHVPRAWLNSGGNSLVVFEEWGGDPNGIALGTINQQHMSYNYCLGNTKKLTSESYVVRTL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 Gene3D Glycosidases 19 341 - -
Pste2g01382 747 Gene3D - 430 575 - -
Pste2g01382 747 FunFam Beta-galactosidase 585 726 - -
Pste2g01382 747 FunFam Beta-galactosidase 289 416 - -
Pste2g01382 747 PANTHER BETA-GALACTOSIDASE RELATED 17 725 IPR001944 GO:0004553|GO:0005975
Pste2g01382 747 FunFam Beta-galactosidase 440 577 - -
Pste2g01382 747 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Pste2g01382 747 SUPERFAMILY Galactose-binding domain-like 577 723 IPR008979 -
Pste2g01382 747 SUPERFAMILY Galactose-binding domain-like 398 567 IPR008979 -
Pste2g01382 747 SUPERFAMILY (Trans)glycosidases 25 341 IPR017853 -
Pste2g01382 747 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Pste2g01382 747 Pfam Beta-sandwich domain in beta galactosidase 344 414 IPR041392 -
Pste2g01382 747 Gene3D - 585 727 - -
Pste2g01382 747 FunFam Beta-galactosidase 20 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01382 Pste-Chr2 15144999 15151378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01382 12 717 Glycoside Hydrolase AT5G56870 72.034 0.0 1080
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01382 2 15144999 15151378 Pste2g01382 2 15144999 15151378 ECH
Pste6g03680 6 26004382 26009778 Pste2g01382 2 15144999 15151378 PCT