Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03164 atggagtcttttcatcgattcagattgtgggtcttcgcttttctatgcttaacgtttcaatcgggaaatgggttttaccttcccggaagttaccctcacaagtatggtgttggggacgagttgtcggtgaaggtgaattctctgacttcaattgatacagaaatgcctttcagttattatagcttacccttttgcaagcctgaggggggtgtgaaggacagtgctgagaatctgggggaactcctgatgggggatcggatcgagaactcaccttacaggtttaagatgtacaccaatgagtctgagatattcttgtgtcaagtggacaagctctccgatgatcagttcaagatcttgaagaagaggattgatgagatgtatcaggttaatttgatactggataatttgcctgccattaggttcacaaaaaaagaggagtactttttgagatggacagggtaccctgttggcataaagattcaggaggtgtattatctgtttaaccatttgaggtttaatgtccttgtccataagtatgaggagccgaatgtggcgcgtgttatggggacaggtgatgcggctgagatgatccctccaattggtaaggaaggatctgacaaacccggttacatggttgttgggtttgaggtgataccttgtagtgttttgcataatgctgattcggctaaagggttgaagatgtacaacaaatatccatcgccaatgaaatgcgatccgtcgacggtggcgatgcctataaaggaagggcagccaattgcgtttacatatgaggtgacgtttgaggagagtgatatcaagtggccatctagatgggatgcctacttgaagatggagggagccaaagtccattggttctctatcctcaattcacttatggtgataacttttctagctggtattgttcttgttatattcctgaggactgtgaggagggatctgacccgatacgaggagcttgataaggaggcccaagcacagatgaatgaggagttgtctggttggaagcttgttgtgggagatgttttccgtgccccgtcggatcctgctttgttgtgcataatggttggggatggagttcagattctggggatggctgttgtcacgattatgtttgctgctcttggattcatgtcacctgcatcacgtggtacacttatcacaggtatgctgtttttctacatgatacttggtgttgctgctggttatgttgcagttcggctatggaggacaattgggtgtggtgatcagaagggatggatttccgttgcatggaaagctgcttgtttcttccccggaatcgcctttttcatcctcacaaccttgaacttcctattgtggggaagccacagcaccggggccattccattttcactctttgttatactcattttgctttggttctgcatttctgtaccacttacccttattggtggcctcttcggagcaagggcacctcacatagagtatccagttaggacgaatcaaattcctcgagaaattccccagcagaggtacccatcatggcttttggttctcggtgccggcacccttccattcggtaccttgttcatcgagctcttcttcatcatgtccagtatttggatgggtcgcgtatactatgtatttggatttctcttcattgttatgatacttcttgtggttgtctgtgctgaggtatctctggttctaacctacatgcacctctgtgtcgaggactggagatggtggtggaaatcattctttgcatctgcttctgttgccatatacatctttttgtactccataaactatcttgtatttgatctcaagaatttgagtggacccgtttctgcaactctttacttgggatattccttattcatggtgctagcaatcatgttggctacaggcacagttgggttcctttcctcattctggttcgtctattacttgttctcttcggtcaagttggattga 1977 0.0 MESFHRFRLWVFAFLCLTFQSGNGFYLPGSYPHKYGVGDELSVKVNSLTSIDTEMPFSYYSLPFCKPEGGVKDSAENLGELLMGDRIENSPYRFKMYTNESEIFLCQVDKLSDDQFKILKKRIDEMYQVNLILDNLPAIRFTKKEEYFLRWTGYPVGIKIQEVYYLFNHLRFNVLVHKYEEPNVARVMGTGDAAEMIPPIGKEGSDKPGYMVVGFEVIPCSVLHNADSAKGLKMYNKYPSPMKCDPSTVAMPIKEGQPIAFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSDPALLCIMVGDGVQILGMAVVTIMFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGCGDQKGWISVAWKAACFFPGIAFFILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGLFGARAPHIEYPVRTNQIPREIPQQRYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVMILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASASVAIYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03164 658 Coils Coil 313 333 - -
Pste6g03164 658 Pfam Endomembrane protein 70 56 610 IPR004240 GO:0016020
Pste6g03164 658 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 24 658 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03164 Pste-Chr6 19892193 19894593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03164 1 658 Miscellaneous Gene Families AT5G35160 85.584 0.0 1150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03164 6 19892193 19894593 Pste6g03164 6 19892193 19894593 ECH
Pste6g03164 6 19892193 19894593 Pste2g00933 2 9969625 9971607 PCT