Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02750 atgtcaggcactggcactgccatccgccgcttccactacacctgcactgcattatcgtcaatcctctcatcacctccacttactcgccaatcccaacagtattaccccacgcgctcacccctctcctcccaccttcctcgttatgcttcatccgtccccaaacaaccctttgtcggcggcgacgaccaccattatcccaccggagactttgatttcaaacccatcacaggatggaaaaagttcatcgccaacctcaagatgcttacagctttaccctggacgcgtatccgacacggcaccgttttaacaatcaagttgcgcggccagatatcggatcagcttaagactagattctctccgggattatctctgcctcaaatctgtgataatttcttcaaggcagcctatgatcctcgaatttccgccatctatcttcatattgacattttaaattgtggttgggcaaagctcgaagaaattcgaaggcaaattatgaatttcagaaaatcaggaaaatttattgtggcttatgtcccttcatgccgagaaaaagaatattatattgcgtgtgcctgtgaagaaatatatgcccctccaagtgcttatttttctttgtttggattggctgttcaagccccatttctcagaggtgttttagagaatcttggaattgaacccgaagtggaaaggattggcaaatacaaaagtgtaggagatcaacttacccggaaaaccatgtcggaagatcaccatgagatgcttactacattgcttgataatatctatacaaattggctggacaaagtgtcttctgctagaggaaagaaaagagaagatattgagaacttcataaatgaaggtgtctatcaagtagagagacttaaagaagagggcttcatatcagacataatctatgatgacgaggttattgctcggttaaagaagagacttcaagttaaaacagataaaaatctgcccatggttgataacagaaaatactgtggagtgaggaaatcaactgttggactatcaggcggtaaagaattaatagccatcatccgagcttcagggagtattcgtcgtattgagagtccattaagttcccgtagctctggtatcattggagagaagttaattgggaagatacgcagagttagagagtcaaataaatacaaggctgctattatccgaattgacagtccaggaggtgatgctcttgcttctgatttgatgtggagagaaatcaggcttctcgctgcctcaaaacccgtcattgcttcaatgtctgatgtagcagcaagtggagggtactacatggcaatgggagcaggagttattgttgcagaaagtcttaccttaactggttcaattggagtggtcacagcaaaatttaaccttgggaaactttatgagaagattggtttcaacaaagagatcatatcaagaggtagatatgcggagcttggtgcagctgaacagcgatctttaagatcagatgaagcagagctattttctaagtctgcgcagcatgcttataaacaatttcgagataaggcggctttatctagatctatgagtgtagacaagatggaagaggttgcacagggaagggtttggactggtaaggacgcagcttctctcggtttagttgatgctattggtggtctttctcgagctgttgccatagcaaagttgaaggccaatatacctcaagacagacaggttactgttgtggagctctcgagacccagtcctactctacctgagattttaagtggtctaggtaattctgtagttggagtagacagaacattaaatgaattattacaggacttgacgttttcccatggagtccaagcacgaatggacggaatcatgtttgagaaattagaaggatatccatatgccaaccccattttggcattgataaaagattatcttagttccctgtag 1953 0.0 MSGTGTAIRRFHYTCTALSSILSSPPLTRQSQQYYPTRSPLSSHLPRYASSVPKQPFVGGDDHHYPTGDFDFKPITGWKKFIANLKMLTALPWTRIRHGTVLTIKLRGQISDQLKTRFSPGLSLPQICDNFFKAAYDPRISAIYLHIDILNCGWAKLEEIRRQIMNFRKSGKFIVAYVPSCREKEYYIACACEEIYAPPSAYFSLFGLAVQAPFLRGVLENLGIEPEVERIGKYKSVGDQLTRKTMSEDHHEMLTTLLDNIYTNWLDKVSSARGKKREDIENFINEGVYQVERLKEEGFISDIIYDDEVIARLKKRLQVKTDKNLPMVDNRKYCGVRKSTVGLSGGKELIAIIRASGSIRRIESPLSSRSSGIIGEKLIGKIRRVRESNKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGVIVAESLTLTGSIGVVTAKFNLGKLYEKIGFNKEIISRGRYAELGAAEQRSLRSDEAELFSKSAQHAYKQFRDKAALSRSMSVDKMEEVAQGRVWTGKDAASLGLVDAIGGLSRAVAIAKLKANIPQDRQVTVVELSRPSPTLPEILSGLGNSVVGVDRTLNELLQDLTFSHGVQARMDGIMFEKLEGYPYANPILALIKDYLSSL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02750 650 SUPERFAMILY ClpP/crotonase 90 305 IPR029045 -
Pste6g02750 650 Pfam Peptidase family S49 167 319 IPR002142 GO:0006508|GO:0008233
Pste6g02750 650 Pfam Peptidase family S49 418 568 IPR002142 GO:0006508|GO:0008233
Pste6g02750 650 Gene3D - 495 617 - -
Pste6g02750 650 CDD S49_SppA_67K_type 102 315 IPR047217 -
Pste6g02750 650 PANTHER PROTEASE 4 62 649 - -
Pste6g02750 650 Gene3D - 240 335 - -
Pste6g02750 650 Gene3D - 100 237 - -
Pste6g02750 650 SUPERFAMILY ClpP/crotonase 352 555 IPR029045 -
Pste6g02750 650 Gene3D - 346 494 - -
Pste6g02750 650 NCBIfam signal peptide peptidase SppA 351 563 IPR004635 GO:0006508|GO:0008233
Pste6g02750 650 CDD S49_Sppa_N_C 350 564 IPR047272 -
Pste6g02750 650 PIRSF Protease_4_SppA 59 650 IPR004634 GO:0006465|GO:0008233|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02750 Pste-Chr6 15122918 15134732 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02750 6 15122918 15134732 Pste6g02750 6 15122918 15134732 ECH
Pste6g02750 6 15122918 15134732 Pste2g00374 2 3192515 3204890 PCT