Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00374 TTAAGAATGAGATAAAGAGATGAAATGGCAGGCGGACAGTAAACGACGACGTGGAGGAAGGTGGACCTCCTCGTGTCATCCACTTCCTCACTTCCCTTCCCATTCCCTTCCCTTCGCTCTCTTCACTTCACTCACTCACTCACAATGTCGAACCTCCTTCTTCAACCCACTCCTCCCCTCACTCACAGCTTCACCACATTCTCTTCCGCTTCTACCCTCCAATCTCCCCTCCGATTCTCCCTTTCTCTTCTCTCCCGTCCTCTCCCCCTCTCTCTCTCTCCCCTCCGCGCCTTCGATTCCTCTTCCGACGCCAAAACCCAACGAGAACTCAAAGAAGACGGCGATGATGAGAATCGGAGCGTTGGAATCGCCGACGAGGATTATCCGAGCGGCGAATTCGACTTCGAACCGATTACTGGATGGAGAAGCTTTCTCGTTAAGCTTAAGATGCTCGTTGCGTTCCCTTGGGAGCGTGTCCGCAAGGGTAGCGTTCTCACTATGAAGCTTCGCGGCCAGATATCTGACCAAGTGAAGAGTAGGTTCTCTCCGGGACTTTCTCTGCCTCAAATTTGTGAGAATTTTTTGAAAGCGGCATATGATCCTCGTATTTCTGGGATCTATCTGCATATTGAAAGTTTGAATTGCGGATGGGGTAAAGTAGAAGAAATTAGAAGGCATATATTGAATTTCAAAAAATCAGGAAAATTTGTTCTGGCTTATATCCCTTTATGTCAAGAAAAAGAGTATTACCTTGCGTGTGCATGTGAAGAGATATACGCTCCACCCGGTGCTTACTTTTCTTTGTTTGGATTGACTGTTCAAGCCTCATTCCTCAGAGGTATCTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGAAAATACAAAAGTGCAGGTGATCAACTAGCTCGAAGAACTATATCTGAAGAAAATTGTGAGATGCTGACTGCGTTGCTTGATAATATCTATACAAATTGGTTGGATAAAATCTCTTCTGCCAAAGGAAAAACAAAAGAAGATATTGAGAAATTCATAAATGAAGGTGTTTATCAGGTAGACAAGCTGAAAGAAGAGGGACTCATATCAAATATAATCTATGATGATGAGATTAATGCCATGCTGAAGGAGAGACTTGGAGTGAAATCAGATAAAGATCTGCCTATGGTGGACTACAGGAAATACTCTCGAGTTAGGAAATGGACTGTTGGAATATCAGGTGGTAACGATCATATAGCCATTATCCGAGCATCTGGGAGTATTAGTCGTGTAGAGAGTCAATTAAGTGTCTCTAGCTCAGGCATCATCGCAGAGAAGTTTATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATTATCAGAATTGACAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTAGTTGCTTCAATGTCTGATGTGGCAGCCAGTGGAGGGTACTACATGGCAATGGGAGCTGATGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCGATAGGAGTGGTCACAGGAAAATTTAACCTGGGGAAACTGTATGAGAAGATCGGCTTTAGCAAAGAAATTATATCTAGGGGAAGATATGCTGAGCTCCTTGCTGCTGAGCAACGTCCTTTCAGACCAGATGAAGCAGAACTATTTGCCAAATCTGCTCAGCATGCTTATAAACAATTTCGAGACAAGGCAGCTTTGTCCAGATCAATGACTGTAGAAAAGATGGAGGAGGTTGCACAGGGAAGGGTTTGGACTGGTAATGATGCCGCTTCACGCGGTTTAGTTGATGCTATTGGTGGACTTTCTCGAGCTATTGCGATAGCAAAAATGAAAGCTAATATACCTCAAGTCAAACAGGTTACACTTGTGGAGATCTCCAGACCCAGCCCTTCTTTACCTGAGCTTTTGTTAGGCATTGGGAGTTCGCTCGTTGGAGCTGACAGAACGGTGAAGGAACTGCTACAGTGCTTGACATTTTCTGATGGAGTTCAAGCTCGGATGGATGGAATTATGTTTCAGGCATTGGAAGATTATCCTTTTGGCAACCCCATTTTGTCAATTATAAAAGATTACCTCAGTTCTCTTTAGTTGTCCATAGTCCATTTCAATAATTTTGTTTCATTATATTCATATATAGTTTTCCCTATTCCTTTTTTCAAGGTTGTTTGAATGGGTAGTAGATGAAGGTCTCCTTCCATGTCTCCCTCACAACCCTTGTACATGCATGATGTAAAGTTGAAAAGTTCAAAGCATAGTTTTATGCATGAACTAAAACGGAATTTCGTGTCGAGTGTGAGCTGTCCA 2358 0.4309 MSNLLLQPTPPLTHSFTTFSSASTLQSPLRFSLSLLSRPLPLSLSPLRAFDSSSDAKTQRELKEDGDDENRSVGIADEDYPSGEFDFEPITGWRSFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIESLNCGWGKVEEIRRHILNFKKSGKFVLAYIPLCQEKEYYLACACEEIYAPPGAYFSLFGLTVQASFLRGILDNIGIEPQVERIGKYKSAGDQLARRTISEENCEMLTALLDNIYTNWLDKISSAKGKTKEDIEKFINEGVYQVDKLKEEGLISNIIYDDEINAMLKERLGVKSDKDLPMVDYRKYSRVRKWTVGISGGNDHIAIIRASGSISRVESQLSVSSSGIIAEKFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVVASMSDVAASGGYYMAMGADAIVAESLTLTGSIGVVTGKFNLGKLYEKIGFSKEIISRGRYAELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAALSRSMTVEKMEEVAQGRVWTGNDAASRGLVDAIGGLSRAIAIAKMKANIPQVKQVTLVEISRPSPSLPELLLGIGSSLVGADRTVKELLQCLTFSDGVQARMDGIMFQALEDYPFGNPILSIIKDYLSSL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00374 665 PANTHER PROTEASE 4 69 664 - -
Pste2g00374 665 MobiDBLite consensus disorder prediction 55 75 - -
Pste2g00374 665 SUPERFAMILY ClpP/crotonase 106 323 IPR029045 -
Pste2g00374 665 PIRSF Protease_4_SppA 43 664 IPR004634 GO:0006465|GO:0008233|GO:0016020
Pste2g00374 665 Gene3D - 360 509 - -
Pste2g00374 665 CDD S49_Sppa_N_C 364 579 IPR047272 -
Pste2g00374 665 Pfam Peptidase family S49 433 583 IPR002142 GO:0006508|GO:0008233
Pste2g00374 665 Pfam Peptidase family S49 182 334 IPR002142 GO:0006508|GO:0008233
Pste2g00374 665 NCBIfam signal peptide peptidase SppA 365 579 IPR004635 GO:0006508|GO:0008233
Pste2g00374 665 MobiDBLite consensus disorder prediction 55 77 - -
Pste2g00374 665 SUPERFAMILY ClpP/crotonase 355 570 IPR029045 -
Pste2g00374 665 CDD S49_SppA_67K_type 117 330 IPR047217 -
Pste2g00374 665 Gene3D - 510 635 - -
Pste2g00374 665 Gene3D - 114 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00374 Pste-Chr2 3192515 3204890 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02750 6 15122918 15134732 Pste2g00374 2 3192515 3204890 PCT