Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02378 GTTTGCCGCCTGGAAGAAACAATGGGACAACCTTAGTATTTAACTATTTATTACACTGATTCCTTGGTCAACGCTCGCGATCTCCTCTGTTTCCTAACTAATTCGAAGCCTAACCGTTGTTCGGTGCAGCAATAGGGTCGGATCTTACCTTAATTCGAGTTTTATGGCCACGTTGAAGAGCTATTGTTGTAATAGCATGTTGCTGAGAGGACCCGGTTCAGTGTTTTCGCGCTCCAATGCCAGCACTTGCACCAAGAGGAACTCATACTGGAAGCCTCCACAAGCATCTGCAAGTAATGATTTTCACCTCCCAATTAGCAGCTCAGCGGTAAAAAATAGGTGGATTTTGAATGATGAATATTCTGTTCCGACATCGATTGACGATATAAGGAGTCTGCGATTGATAACGGCGGTTAAAACACCATACCTACCTAACGGCCAAGTTGATCTTGATGCATATGATAATCTGGTGAATATGCAGATTGCAGATGGCGTTGAAGGTATTCTTGTTGCTGGAACAACTGGTGAGGGCCAACTAATGACCTGGGATGAACAAATAATGCTTATTGCACACACAGTAAACTGTTTTGGTGACAAAGTTAAGGTTGTTGGTAATGCTGGAAGCAACTGCACATCAGAGGCAATTAAGGCCACTGAGAGGGGTTTTGATGTTGGAATGAATGCTGCGCTTCATATAAACCCTTACTACGGCAAAACCTCATGGGATGGTTTGGTTGCTCACTATAACAATGTGCTCTCCATAGGCCCCATAATCATATATAACATACCTTCAAGGACTAATCAAGATATACCTCCTAGTGTAGTTCAAACCTTAGCTCAATGTCCTAACTTAGTTGGTGTCAAGGAATGTGTGGGAACTGAGAGGATTAAACAGTATACAGATCAAGGAATTGCTGTATGGACAGGAATAGATAAAATAAGCCATGATGCTAGATGGGAATTTGGGGCTGTTGGAGTGCAATCTGTTGCTGGCAACTTGATTCCTGGTTTAATGAGAGAACTCATGTTTGAGGGCAAAAATCCTACACTGAATTCAAAGCTGATTCCTTTGTTTGATTGGCTTTCCTCGGAGCCTGTCCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGGATCATCAAACCAGTTTTCAGGCTACCCCATGTACCCCTGCCTGTGGAAAAAAGAATAGAGTTTGTCATTTTGGTGAAAAAAATCGGTCGAGAGCATTTTGTTGGACAAAAAGATGTTCAGGTTCTTGATGATGATGACTTTATCTTAGTTGGTCGATATTAATGTAGTTTATCTTCTTAAAGTCTTATTTGAAGTTACACTAATACACTTCCTCTTGGCTTGTCAAGGGTCAAAACCAGATCATTTACCATAGCATCAGTTCAAGTAAAACAGAAACAATTGTGGTGGGAAACTGTTTCAAAATAGTTCCAACTTATTCTATCTGCTGATGAATTTTGTTTGAACTTTGTTTAAATATTAGCA 1498 0.4079 MATLKSYCCNSMLLRGPGSVFSRSNASTCTKRNSYWKPPQASASNDFHLPISSSAVKNRWILNDEYSVPTSIDDIRSLRLITAVKTPYLPNGQVDLDAYDNLVNMQIADGVEGILVAGTTGEGQLMTWDEQIMLIAHTVNCFGDKVKVVGNAGSNCTSEAIKATERGFDVGMNAALHINPYYGKTSWDGLVAHYNNVLSIGPIIIYNIPSRTNQDIPPSVVQTLAQCPNLVGVKECVGTERIKQYTDQGIAVWTGIDKISHDARWEFGAVGVQSVAGNLIPGLMRELMFEGKNPTLNSKLIPLFDWLSSEPVPIALNTALAQLGIIKPVFRLPHVPLPVEKRIEFVILVKKIGREHFVGQKDVQVLDDDDFILVGRY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02378 377 SUPERFAMILY Aldolase 80 344 - -
Pste6g02378 377 SMART DHDPS_2 77 353 IPR002220 GO:0016829
Pste6g02378 377 Pfam Dihydrodipicolinate synthetase family 78 351 IPR002220 GO:0016829
Pste6g02378 377 PRINTS Dihydrodipicolinate synthase signature 201 218 IPR002220 GO:0016829
Pste6g02378 377 PRINTS Dihydrodipicolinate synthase signature 178 194 IPR002220 GO:0016829
Pste6g02378 377 PRINTS Dihydrodipicolinate synthase signature 146 164 IPR002220 GO:0016829
Pste6g02378 377 PRINTS Dihydrodipicolinate synthase signature 110 131 IPR002220 GO:0016829
Pste6g02378 377 ProSitePatterns Dihydrodipicolinate synthase signature 1. 113 130 IPR020624 GO:0016829
Pste6g02378 377 ProSitePatterns Dihydrodipicolinate synthase signature 2. 206 236 IPR020625 GO:0016829
Pste6g02378 377 Gene3D Aldolase class I 71 377 IPR013785 -
Pste6g02378 377 PANTHER DIHYDRODIPICOLINATE SYNTHASE 61 362 IPR002220 GO:0016829
Pste6g02378 377 CDD DHDPS 79 346 IPR005263 GO:0008840|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02378 Pste-Chr6 11593770 11596794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01683 5 10660707 10664115 Pste6g02378 6 11593770 11596794 PCT