Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01683 ATGGCCATGCTGAAGACCGTGTGTTTCAGAGGAGCCGCCTTTCCCGTTTGCTCCTCCAACGTCACCAATAATGAAAACACTAGGAGTTCATACTGGAAGCCTGTGCAAGCAGCTGTAAAGTCCAATTTTCATCTCCCAATGCGAAGTTTTGAGTTGAAAAATAGGACATCTTCAGAGGACATAAAGAGTCTGCGATTGATAACTGCCATTAAAACTCCATACCTACCTGATGGTCGATTTGATCTTGAAGCATATGATGACTTGTTGAATATGCAGATTGGACAAGGGGCTGAAGGTGTTATTGTTGGTGGGACAACTGGTGAAGGACAATTAATGAGCTGGGAAGAGCACATAATGCTTATTGCTCATACTGTCAACTGTTTTGGTGGGAAAATTAAGGTTATTGGAAATACTGGAAGCAACTCCACCAGGGAAGCAATTCATGCCACCGAGCAGGGTTTTGCTGTTGGAATGCATGCCGCCCTTCATATAAACCCTTACTATGGAAAAACCTCTTTGGATGGTATGGTTGCTCATTTTCAAAGTGTGCTTTCCATGGGACCCACAATAATTTATAATGTGCCTTCACGGACTGGTCAAGACATTCCCCCACATGTAATTCAAACCTTAGCTGAAAATGCTTACTTAGCTGGTGTCAAGGAGTGTGTGGGAAATGACCGGATCAAGCAGTATACAGATAATGGAATAGTTGTTTGGAGTGGGAATGATGATCAGTGCCATGATGCTAGATGGGGTTATGGGGCTACTGGGGTGATATCTGTTGCAAGCAACTTGGTTCCTGGTTTAATGCGGGAACTCATGTTTGGTGGCATAAACCCTACACTAAATTCTAAGCTCTTACCTCTGATTGACTGGCTTTTCCACATGCCAAATCCCATTGGTTTGAACACTGCTCTTGCTCAACTTGGGGTTGTCAGGCCCGTTTTTAGGCTACCGTTTGTACCTCTCCCTGTGGAGAAAAGGATAGAATTTGCCAATTTGGTGAAGGAAATTGGTCGAGAGCATTTTGTTGGAAATAAAGATGTTGAGGTTCTTGATGACGACGACTTTTTCTTAGTTAGTCGTTATTAAGTTACCTAGTAGGTTCGTTGTATCCTTTGTAGGGAGTTTGCCAAACTTCAAATCCAGATGAGTCTGTTGTAGTGAACAAGATAACGATCATCTTGTTTCTTTTTACTGACTACATTTTAGTTGCAAACTGGCTCAAAACTTCAAATTTATTCTGAATTTTAAGTTCTATTGCATGTTGCATTAACCTTGTTTTGATCCTCACTAAAACCCTTTTTACAACCCGAGTATGTAACTATAGCATTCAGATCTCTGCTTAAATTGTGGAAGGTGAATATTAAAGTGAAA 1377 0.4132 MAMLKTVCFRGAAFPVCSSNVTNNENTRSSYWKPVQAAVKSNFHLPMRSFELKNRTSSEDIKSLRLITAIKTPYLPDGRFDLEAYDDLLNMQIGQGAEGVIVGGTTGEGQLMSWEEHIMLIAHTVNCFGGKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLDGMVAHFQSVLSMGPTIIYNVPSRTGQDIPPHVIQTLAENAYLAGVKECVGNDRIKQYTDNGIVVWSGNDDQCHDARWGYGATGVISVASNLVPGLMRELMFGGINPTLNSKLLPLIDWLFHMPNPIGLNTALAQLGVVRPVFRLPFVPLPVEKRIEFANLVKEIGREHFVGNKDVEVLDDDDFFLVSRY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01683 363 SMART DHDPS_2 63 339 IPR002220 GO:0016829
Pste5g01683 363 ProSitePatterns Dihydrodipicolinate synthase signature 2. 192 222 IPR020625 GO:0016829
Pste5g01683 363 PRINTS Dihydrodipicolinate synthase signature 164 180 IPR002220 GO:0016829
Pste5g01683 363 PRINTS Dihydrodipicolinate synthase signature 96 117 IPR002220 GO:0016829
Pste5g01683 363 PRINTS Dihydrodipicolinate synthase signature 132 150 IPR002220 GO:0016829
Pste5g01683 363 PRINTS Dihydrodipicolinate synthase signature 187 204 IPR002220 GO:0016829
Pste5g01683 363 Gene3D Aldolase class I 57 363 IPR013785 -
Pste5g01683 363 PANTHER DIHYDRODIPICOLINATE SYNTHASE 52 348 IPR002220 GO:0016829
Pste5g01683 363 CDD DHDPS 65 335 IPR005263 GO:0008840|GO:0009089
Pste5g01683 363 SUPERFAMILY Aldolase 66 338 - -
Pste5g01683 363 ProSitePatterns Dihydrodipicolinate synthase signature 1. 99 116 IPR020624 GO:0016829
Pste5g01683 363 Pfam Dihydrodipicolinate synthetase family 64 337 IPR002220 GO:0016829
Pste5g01683 363 NCBIfam 4-hydroxy-tetrahydrodipicolinate synthase 66 336 IPR005263 GO:0008840|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01683 Pste-Chr5 10660707 10664115 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01683 5 10660707 10664115 Pste5g01683 5 10660707 10664115 ECH
Pste5g01683 5 10660707 10664115 Pste6g02378 6 11593770 11596794 PCT