Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02174 ATGGGTATGGAAGATGCAAAACAAAGATATGCTGTTGTCACAGGTGCAAATAAAGGAATAGGATTGGAGACTGTTAAAGGATTGGCCTCAAATGGAATCAAGGTGGTGCTCACAGCCAGGGATGTGAAGAGGGGTTACCAAGCTGTTGAGGATTTGAAGAAACAGTTTGGTTTCACTGACCTTGTGGTGTTTCACCAGCTTGATGTCACTAACCCTTCTAGTATTGCTTCTTTGGTTGAGTTTGTTAAGAGCCAATTTGGTAGACTAGATATCTTGGTGAACAATGCAGGAATCAGCGGGTTCAATACAGATGGCATGGTGCCGTCCAAAATTAACTGGAAGGAGCTACCTCAAACTTATGAGATGGCTGAAAAATGCCTAACAACAAACTATTATGGTGCTAAGGAAACCACAGAGGCATTTCTTCCCCTTCTTCGGTTATCCAATTTACCCATGATTGTTAATGTTTCCTCTGAAGCAGGACTCTTAAAGTACATATCAAACGAATGGGCTAGGAGGGTGTTAGATGACACAGAAAATCTCACTGAAGAGCTAATAGATGAGGTTCTGAAGGAGTACATGAAAGACTTAGAAGAAGGTTCACTAAAACCAAAGGGGTGGCCAACCTACCTCTCTGCATATATGGTCTCAAAAGCAGCCATGAATTCTTACACTAGGCTTTTGGCCTATAGGCAACCAAAATTGTGCATCAATTGTGTCTGTCCTGGTTTTGTTAAAACAGACATTAACAGAAACACTGGCATCTTATCAGTTGAAAATGGTGCAGCCAGCGTTGTAAGATTAGCCCTGTTGCCTAATGGTTCCCCTTCTGGCCACTTCTTCACTCGGCAAGAAGTGTCAAGCTTTTGAATGAATTTTAGATTCTGATTGGATAAATTTTTCCCATAAATATTTATGAGAGAAGAAAATTAGAAAGAAAAATTAAATGAGCTTGTCTTATAAACTAATTAAAATTGGCTTATACACCAGCGAATATGTAAACATTCCCTCGTATCAGCTTTTTTAAAGTTATGTATAAACTATTTTTTTTTATTTTGTTTTTCTCCTTATTTCTTCTAGTATAAGTATCTACAGAAAAAATTATCCAAACAGAAACTGTCTTACAACTTGTGGATCACATGAGGAAAAAATGATAGGAGGTGTGGCGTGTGTTGGATGAAATTTTTATCCATCTGGTCTATTTTGTCAGATAATGGCATGTGGGGAGATGCATCTAAATTACTTACTTGGCTCTTCTATCTTCTCACATTGTTGGCGCTTCAAATGGTCAAATTCTAAATTGCAATGATTTTTGGACCATCATATATATACCAGCAGGACAAGAACCTTTCGGCTGTGTGGAAATTGTCAACATTAGGTCATTACAATGTTTGGCCTTGTCATAGTCGTGATCAGAGTGCTATTTGACTTCAAACTTTGAACACACGTGCAACGGTAAAGCACTGCTGATAGTAAAAGCAGCAAATGATGAATGTCCAGAATTCATGACACGACAAAGAAAGACAACAATTGTAACAGGACAGACACCATTATTTGTGTAGACTTCGCCAAATTTACTTTGTGTCTCTCTCGTGTAACATAATATTATCGAGATCATATTATAAGGATCCTTATTACATTGAAAGTGTGTGGCGCAAACTTTTCAAAGCTTGCAGTTGACTGAATTTTAATCACATGACAAATGCTCATCTAACTGGTTTTAGC 1725 0.3797 MGMEDAKQRYAVVTGANKGIGLETVKGLASNGIKVVLTARDVKRGYQAVEDLKKQFGFTDLVVFHQLDVTNPSSIASLVEFVKSQFGRLDILVNNAGISGFNTDGMVPSKINWKELPQTYEMAEKCLTTNYYGAKETTEAFLPLLRLSNLPMIVNVSSEAGLLKYISNEWARRVLDDTENLTEELIDEVLKEYMKDLEEGSLKPKGWPTYLSAYMVSKAAMNSYTRLLAYRQPKLCINCVCPGFVKTDINRNTGILSVENGAASVVRLALLPNGSPSGHFFTRQEVSSF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02174 289 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 9 287 - -
Pste6g02174 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 233 IPR002347 -
Pste6g02174 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 IPR002347 -
Pste6g02174 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 87 98 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 276 289 IPR002347 -
Pste6g02174 289 PRINTS Glucose/ribitol dehydrogenase family signature 214 233 IPR002347 -
Pste6g02174 289 CDD carb_red_PTCR-like_SDR_c 9 289 IPR045313 GO:0016616
Pste6g02174 289 FunFam (+)-neomenthol dehydrogenase 4 289 - -
Pste6g02174 289 Gene3D - 3 289 - -
Pste6g02174 289 Pfam short chain dehydrogenase 10 166 IPR002347 -
Pste6g02174 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 275 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02174 Pste-Chr6 10302416 10305147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02174 7 251 Acyl Lipid Metabolism Gene Families AT1G63380 24.900 6.40e-11 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02174 6 10302416 10305147 Pste6g02174 6 10302416 10305147 ECH
Pste5g01516 5 9654885 9677716 Pste6g02174 6 10302416 10305147 PCT