Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01516 CTTCAGGTGGAATTGTATGCTCTTGTTACTGGGGCAAACAAAGGGATAGGATTGGAGACTGTTAACCAGTTGGCCTCAAATGGAGTGAAGGTGGTGCTCACAGCTCGAGATGAAGACAGAGGCCTTGAAGCCATTGAGAGAGTGAAAGAGTTTGGTCTCTCTGAGTTGGTGATGTTTCACCAGCTTGATGTGACCGACTCAGCTAGTATTGTTTCAGTAGTAGAGTTTGTGAACAATGCAGGAATCAGTGGTGTCAATCCATATGAAATGGAAGGTTCAGAAATTAACTGGAAAGAATTGACTCAAACTTGTGAGATGGCAGAAAAGTGCCTAAAAACAAACTACTACGGTGCAAAGGAAACAACTGAGGCATTTCTTCCCCTTCTGCAATCGTCTAACTCACCTAGGATTGTCAATGTTTCCTCCCAAGCAGGGTTGCTAAAGGGAATAGCAAATGAATTGGCTAAAGGGGTGTTTGATGATGATGAAAATCTGACAGAAGAGAGAATAGATGAGGTACTGAAAGAGTTTATCAAAGACTTCAAAGAGGGTTCACTTGAAAACAAAGAGGCAAAACTAAGGTATGCTGTTGTTACCGGAGCAAACAAAGGGATAGGATTTGAGACTGTTAAAGAGTTGGCCTCAAATGGAGTCAAGGTGGTGCTCACTGCCAGAGATGAGAGCAAAGGCAATGAAGCCATTGATAGATTAAAAGAGAGTGGTCTCTCTGATTTGGTGATTTTTCACCGGCTTGATGTCACTGACTCTACTAGTATTGATACACTAGTAGAGTTTGTTAAGACCCAGTTTGGGAAACTTGATATCTTGGTGAACAATGCAGGAATCAGTGGTGTCAATCTGGATGAAGTGGCGACTGAAGGATCAACAATTAACTGGGAGGAGCTGACTCAAACTTATGAGATGACTGAAAAATGCCTAACAACAAACTACTATGGTGCAAAGAAAACAACTGAGGCATTTCTACGCCTTCTGCAGTTATCAAATTCACCTATAATTGTTAATGTTTCCTCCCAAGCAGGGTTGTTAAAGAACATAGCTAATGAATGGGCTAAAGGGGTGCTTGATGATGCTGAAAATCTTACAGAAGATAGAATAAATGAGGTACTCAAAGAATTTATCAAAGACTTCAAAGAAGGTTCATTAGCAAATAAAGGGTGGCCAACTTTATTGCCTGCCTATAGGGTATCTAAAGCAGCCATGAATTCATACACAAGGATGTTAGCCAAGAAGCACCCAAAGATGTGCATTAATTGTGTGTGCCCTGGTTTTGTGAAAACAGACATAAACAAAAACAGTGGCATCTTATCCGTTGACCAAGGAGCTGCCAGTGTTGTGAGATTGGCACTTCTGCCTGATGGTTCCCCTTCTGGCCTCTTCTTTATTAGGCAAGAATTGTGTGCTGTTGTGACTGGGGCAAATAAAGGTGTTGGCTTTGGGGTATGTAAAAAGTTGGCTTCAAATGGGATAGTGGTGGTGCTAACAGCTAGAGATGAGAAGAGGGGCTTGAAAGCTGTTGAAAGATTGAAAGAGTTTGGTCTCTCTAACTTTCTGGATTTTCATAAGCTTGATGTGGATGACCCTGCTAGTGTTGCTGCCTTAGCTGATTTTATCAAAACTCAATTTGGGAAACTTGATATCTTGGTAAATAATGCAGGTGTTACTGGTGGCAAATTATTAGATGGTGATGCTTTACTTAGAAAGAGAAACGGTGCACAAATTGATTGGAATAAATTAGGGTATCAAACTTACGAGTTAGGTGAACAATGTGTGAAAACAAACTTCTATGGTGTGCAAAGGGTAACTGAGGCTTTTGTTCCCCTTCTCCAGCTATCCACCTCTCCAAGAATTATCAATATTTCCTCCAGAGCAGGGCTCTTGAAGAATATATCAAATGAGTGGGCTAGAACAGTGTTCAGTGACATTGAAAACCTTACAAGAGAAAAAATAGATGAGGTACTTAAAGAGTTTCAGAAAGATTTCAAAGACGGATCATTGGAAATCAAAAGTTGGCCAGTTTTTGCTTCTGCTTATACAATGTCAAAAGCAGCTCTGAATGCTTACACAAGGATTATGGCCATGAAGTACCCACATTTTCACATAAACTCTGTGTGCCCTGGCTTTGTCAAGACTGATATGAACAACAACACTGGACAATTAAGCATTGATGAAGGTGCTGAAACTCCAGCAATGTTGGCACTGATGCCTAATAGTTGTCCTTCTGCTTACAAAATTCCTTGCATTAGAATGGCAACAACAACAATAAGGCATGCAATTGTGACAGGAGCAAACAAAGGGATAGGATTTGGAATATGCAAGCAATTGGTTTTTAATGGTATCACAGTGGTGCTAACAGCAAGGGATGAGAAAAGGGGTCTTGAAGCTGTGGAAAAACTGAAAGAGTTTGGTGTGTCTGACAAAGTGGTATTTCATCAGCTTGATGTGACTGACCCCAAAAGCATTGAATCCCTGGCAAATTTCATCAAAACCCAGTTCGGAAAACTTGATATCTTGGTAGGATTAAGTTTTTGCCTCTTATATGTTATATTATACATCCTTTTTTCTTGTTGGTACCAGCAAAGCACCAGGAACACACATATCTTATCCTCTCCAGGATATTGTCAGAAAAGCTTAGGAAGGGTGAATAATGCAGGAATTCATGGAGCATACGTTGATCGTGACGCTTTAGCTGCTGCTGGGGAAAAAGTTGTCAATGTTGATTGGAGAAAAATCACAACTCAAAATTATGAATCTGCAGAAGAAGGCATTAGAACGAACTACTATGGAGCTAAATTAATGTGTGAAGCACTTATTCCTCTTCTAGAATTGTCAGACTCACCAAGGATTGTTAATGTTTCCTCCTCTATGGGGAAGTTGGAGAAAATACCAAATGAATGGGCTAGAGGAGTCTTAAGTAATGTTGAAAGCCTAACAGAAGAAAAAGTGGATGAGGTTTTGAATCAGTTTTTAAAAGATGTTAAAGAAGATTCATTAGAAACCAAAGGGTGGCCACATATTTTTTCTTCATATATAGTCTCAAAAGTTGCTTTGACTGCCTATACAAGGATTATTGCCAAAAAGTACCCATCTTTCTGCATTAATTCTGTTTGCCCTGGCTTTGTGAAAACAGATTTCAACTACAATACAGGCTATATTAGTGTTGAAGATGGTGCAGAAAGTATTGTAAGGTTGGCTCTTCTACCTAATGGAAGTCCTTCTGGTCTCTTCTTTTCTAGAAGTGAAGTGGCAACATTCTGATGAAAAGTTTGTTGTGTCCTTAAATAGAATAAATATCATGTTGTGTTTCATGTTAGACAAGTATCAAATTAGTACCTTGCACAACAAGAAAATAACTACATGAGGCACATGTCTGCCCAACATTTGTGAGAACAGCCCTATTGTGAATGGCAGATATTAC 3436 0.3967 LQVELYALVTGANKGIGLETVNQLASNGVKVVLTARDEDRGLEAIERVKEFGLSELVMFHQLDVTDSASIVSVVEFVNNAGISGVNPYEMEGSEINWKELTQTCEMAEKCLKTNYYGAKETTEAFLPLLQSSNSPRIVNVSSQAGLLKGIANELAKGVFDDDENLTEERIDEVLKEFIKDFKEGSLENKEAKLRYAVVTGANKGIGFETVKELASNGVKVVLTARDESKGNEAIDRLKESGLSDLVIFHRLDVTDSTSIDTLVEFVKTQFGKLDILVNNAGISGVNLDEVATEGSTINWEELTQTYEMTEKCLTTNYYGAKKTTEAFLRLLQLSNSPIIVNVSSQAGLLKNIANEWAKGVLDDAENLTEDRINEVLKEFIKDFKEGSLANKGWPTLLPAYRVSKAAMNSYTRMLAKKHPKMCINCVCPGFVKTDINKNSGILSVDQGAASVVRLALLPDGSPSGLFFIRQELCAVVTGANKGVGFGVCKKLASNGIVVVLTARDEKRGLKAVERLKEFGLSNFLDFHKLDVDDPASVAALADFIKTQFGKLDILVNNAGVTGGKLLDGDALLRKRNGAQIDWNKLGYQTYELGEQCVKTNFYGVQRVTEAFVPLLQLSTSPRIINISSRAGLLKNISNEWARTVFSDIENLTREKIDEVLKEFQKDFKDGSLEIKSWPVFASAYTMSKAALNAYTRIMAMKYPHFHINSVCPGFVKTDMNNNTGQLSIDEGAETPAMLALMPNSCPSAYKIPCIRMATTTIRHAIVTGANKGIGFGICKQLVFNGITVVLTARDEKRGLEAVEKLKEFGVSDKVVFHQLDVTDPKSIESLANFIKTQFGKLDILVGLSFCLLYVILYILFSCWYQQSTRNTHILSSPGYCQKSLGRVNNAGIHGAYVDRDALAAAGEKVVNVDWRKITTQNYESAEEGIRTNYYGAKLMCEALIPLLELSDSPRIVNVSSSMGKLEKIPNEWARGVLSNVESLTEEKVDEVLNQFLKDVKEDSLETKGWPHIFSSYIVSKVALTAYTRIIAKKYPSFCINSVCPGFVKTDFNYNTGYISVEDGAESIVRLALLPNGSPSGLFFSRSEVATF 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01516 1091 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 271 282 IPR002347 -
Pste5g01516 1091 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 400 419 IPR002347 -
Pste5g01516 1091 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 337 345 IPR002347 -
Pste5g01516 1091 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 461 IPR036291 -
Pste5g01516 1091 FunFam (+)-neomenthol dehydrogenase 189 472 - -
Pste5g01516 1091 Gene3D - 472 751 - -
Pste5g01516 1091 Gene3D - 191 471 - -
Pste5g01516 1091 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 762 1077 IPR036291 -
Pste5g01516 1091 Gene3D - 755 1091 - -
Pste5g01516 1091 CDD carb_red_PTCR-like_SDR_c 473 742 IPR045313 GO:0016616
Pste5g01516 1091 FunFam (+)-neomenthol dehydrogenase 473 751 - -
Pste5g01516 1091 PRINTS Glucose/ribitol dehydrogenase family signature 684 703 IPR002347 -
Pste5g01516 1091 PRINTS Glucose/ribitol dehydrogenase family signature 549 560 IPR002347 -
Pste5g01516 1091 PRINTS Glucose/ribitol dehydrogenase family signature 473 490 IPR002347 -
Pste5g01516 1091 PRINTS Glucose/ribitol dehydrogenase family signature 703 720 IPR002347 -
Pste5g01516 1091 PRINTS Glucose/ribitol dehydrogenase family signature 615 631 IPR002347 -
Pste5g01516 1091 CDD carb_red_PTCR-like_SDR_c 764 1088 IPR045313 GO:0016616
Pste5g01516 1091 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 474 743 IPR036291 -
Pste5g01516 1091 CDD carb_red_PTCR-like_SDR_c 194 467 IPR045313 GO:0016616
Pste5g01516 1091 Pfam short chain dehydrogenase 473 635 IPR002347 -
Pste5g01516 1091 Pfam short chain dehydrogenase 763 845 IPR002347 -
Pste5g01516 1091 Pfam short chain dehydrogenase 7 149 IPR002347 -
Pste5g01516 1091 Pfam short chain dehydrogenase 195 351 IPR002347 -
Pste5g01516 1091 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 671 699 IPR020904 GO:0016491
Pste5g01516 1091 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 762 1089 - -
Pste5g01516 1091 Gene3D - 6 190 - -
Pste5g01516 1091 Pfam Enoyl-(Acyl carrier protein) reductase 676 724 - -
Pste5g01516 1091 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 147 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01516 Pste-Chr5 9654885 9677716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01516 475 725 Acyl Lipid Metabolism Gene Families AT1G24360 24.409 2.78e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01516 5 9654885 9677716 Pste5g01516 5 9654885 9677716 ECH
Pste5g01516 5 9654885 9677716 Pste6g02174 6 10302416 10305147 PCT
Pste6g02181 6 10331955 10333660 Pste5g01516 5 9654885 9677716 PCT