Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02134 atgaaactcttatctgtcagacattctgcaatggattccatttggataggccatttctttctgttattgtccatattggaaactgcttttattccaactgtggccaataatgcaacagattcctactggcttctcagagttaaatcagaactcgaggatccgttaggggtccttagcaactggtctccaataacaaatatctgcaactggaatggaataacatgcgcagttgatcaggaacatattataggcctgaatctgtctcgttcaggaatatcaggttgcatttcagctgacttcagtcacttcacttctcttcaaacacttgatttgtcttcaaattctctttctggttccatcccttccgagctgggacagcttcaaaatctaagaattttgcaactatactcgaataacctctcaggtaacattcctgctgagataggtaacttgaggaagttgcaagttcttagattaggagacaacatgtttactggtgaaattccatctagtgttactaatatgagtgaattgacagttttggctctaggctactgccaattcaatggaagcatacctgttggggttggtaaattgaacaatctaatatctcttgatttacaaatgaacagcattagtggccccatacctgaagagatacaaggctgtgaaaagctccaaaactttgcagcatcaaacaacatgcttgaaggagacatatcttcctctatggggtctcttaaatctttgaaaatactgaacctggccaataacagcttatctggatcaattcctacagctttgagtcacctttctaacttggcatacctgaatttggctggaaacaaactacatggagaaattccttctgagcttaatagtctgattcagctgcagaagctagacctgtccaaaaacaacctctctggatcgatacctctccttaatgtaaaattgcgaagtctggaaactcttgctctgtctgataatgctctgataggtagcattccaagtaacttctgcctcagaagctcaaagcttcagcaacttttcttggctagaaacatgctgtcaggcaaatttccattggagttactcaagtgctcctcaatccaacagttggacctttctgacaacagctttgaaggagaacttccttccagcctggacaaactgcagaacctcacagatctcgtgctcaacaacaacagctttgttggatctctacctcctgaaattgggaacattagtagcttggaaggtcttttcctatttggtaacttcttcacaggcgaaattccaaaggagattggaaggttgcagagtttgagcaccatttacctctatgataaccagttgtctggactcataccaagagagataacaaactgcacgagcttaaaggaaattgacttctttggaaatcaattcacaggacccattccagagactataggtaagcttaagaacttggttgttcttcatcttaggcagaatgacttgtctggtccgatcccaccaagcatggggtattgtaaaagccttcagatattggccttagcagataacatgttgtccggttccattccaccaacattcagttacctatcagaactcactaaaattaccctttacaacaactcctttgaaggacctctccctaattcactctcttctctcaaaagcctcaaaattataaacttttcacacaacaagttcagtggaagtttctttcctctgactggttcaaattcccttaccattctggacctgaccaacaacagcttctcaggtcccatcccttccactctagccaattctagaaacctcagccgtctcagacttggacacaacaatctcacaggaagcattccttctgattttagccacctcacggagctcaactttcttgatttatcattcaacaatttaactggagatgtgccacctcaactctcaaactccaagaaaatggaacacgtcctcatgagtaacaataggttgagtggtaaaatacctgtttggttgggaagtttgcaagaacttggtgagttagatctctcatacaataacttaagtgggagggtgccttctgagcttggtaactgttcaaaactcctcaaggtttctctccatcacaacaatctttctggtaaaatcccccaagagattggaaaactcacgtccctcaatgtccttaatttgcaaaggaacaacttctctggtccaattcccccatcaattcagcaatgcacaaagctgtatgagctcaggctctcagaaaacttgttaacaggtgcaataccagttgagctaggagggcttgctgagttgcaagtgatattggacttgagtaaaaatatcttaactggtgagattccaccgtctctaggaaacctcatgaagctagagagactcaatctttctttcaaccgacttgaaggaaaagttcctcgttcacttggcaaacttacaagcctacacgtgctgaatctctcaaacaaccaccttgacgggcagattccttcaacatttttaggattcccactaagctcattcctgaacaataacgatttgtgtggcccaccattgagatcgtgctcagaatccacgacacaggggaaaatgcagctatcaaacacacaagtggcagtaatcattgtggccattgtctttacgtccacagtaatatgcttagtgatgttgtatattatgctcaggatctggtgtaactggagaaaagtggcaatttcaagtgcagatggtggcactgttgctcacaagaaaaggaatggagagtattggaatatgaattcctttgggttgattccttcaccagataagcagaattcagcaacaacaacttccttctataatctcaaaatggaaactatggaaaatacaaacatgtaa 2913 0.0 MKLLSVRHSAMDSIWIGHFFLLLSILETAFIPTVANNATDSYWLLRVKSELEDPLGVLSNWSPITNICNWNGITCAVDQEHIIGLNLSRSGISGCISADFSHFTSLQTLDLSSNSLSGSIPSELGQLQNLRILQLYSNNLSGNIPAEIGNLRKLQVLRLGDNMFTGEIPSSVTNMSELTVLALGYCQFNGSIPVGVGKLNNLISLDLQMNSISGPIPEEIQGCEKLQNFAASNNMLEGDISSSMGSLKSLKILNLANNSLSGSIPTALSHLSNLAYLNLAGNKLHGEIPSELNSLIQLQKLDLSKNNLSGSIPLLNVKLRSLETLALSDNALIGSIPSNFCLRSSKLQQLFLARNMLSGKFPLELLKCSSIQQLDLSDNSFEGELPSSLDKLQNLTDLVLNNNSFVGSLPPEIGNISSLEGLFLFGNFFTGEIPKEIGRLQSLSTIYLYDNQLSGLIPREITNCTSLKEIDFFGNQFTGPIPETIGKLKNLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNMLSGSIPPTFSYLSELTKITLYNNSFEGPLPNSLSSLKSLKIINFSHNKFSGSFFPLTGSNSLTILDLTNNSFSGPIPSTLANSRNLSRLRLGHNNLTGSIPSDFSHLTELNFLDLSFNNLTGDVPPQLSNSKKMEHVLMSNNRLSGKIPVWLGSLQELGELDLSYNNLSGRVPSELGNCSKLLKVSLHHNNLSGKIPQEIGKLTSLNVLNLQRNNFSGPIPPSIQQCTKLYELRLSENLLTGAIPVELGGLAELQVILDLSKNILTGEIPPSLGNLMKLERLNLSFNRLEGKVPRSLGKLTSLHVLNLSNNHLDGQIPSTFLGFPLSSFLNNNDLCGPPLRSCSESTTQGKMQLSNTQVAVIIVAIVFTSTVICLVMLYIMLRIWCNWRKVAISSADGGTVAHKKRNGEYWNMNSFGLIPSPDKQNSATTTSFYNLKMETMENTNM 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02134 970 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Pste6g02134 970 SUPERFAMILY RNI-like 85 406 - -
Pste6g02134 970 SUPERFAMILY L domain-like 663 843 - -
Pste6g02134 970 PRINTS Leucine-rich repeat signature 298 311 - -
Pste6g02134 970 PRINTS Leucine-rich repeat signature 824 837 - -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 659 876 IPR032675 -
Pste6g02134 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 482 578 - -
Pste6g02134 970 Pfam Leucine Rich Repeat 105 125 IPR001611 GO:0005515
Pste6g02134 970 Pfam Leucine rich repeat 585 644 IPR001611 GO:0005515
Pste6g02134 970 Pfam Leucine rich repeat 233 284 IPR001611 GO:0005515
Pste6g02134 970 Pfam Leucine rich repeat 781 837 IPR001611 GO:0005515
Pste6g02134 970 PANTHER UNNAMED PRODUCT 19 536 - -
Pste6g02134 970 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Pste6g02134 970 SUPERFAMILY RNI-like 385 693 - -
Pste6g02134 970 FunFam Uncharacterized protein 386 481 - -
Pste6g02134 970 FunFam Uncharacterized protein 194 288 - -
Pste6g02134 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 385 - -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 289 385 IPR032675 -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 483 580 IPR032675 -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 581 658 IPR032675 -
Pste6g02134 970 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Pste6g02134 970 SMART LRR_typ_2 319 343 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 679 703 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 199 222 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 727 751 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 800 823 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 824 847 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 247 270 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 440 463 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 488 512 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 631 655 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 392 416 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 103 127 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 151 175 IPR003591 -
Pste6g02134 970 SMART LRR_typ_2 271 295 IPR003591 -
Pste6g02134 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 193 - -
Pste6g02134 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 579 871 - -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 386 482 IPR032675 -
Pste6g02134 970 Gene3D Ribonuclease Inhibitor 37 193 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02134 Pste-Chr6 10108229 10111313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02134 53 889 Receptor kinase-like Gene Family AT5G46330 34.793 5.49e-134 431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02134 6 10108229 10111313 Pste6g02134 6 10108229 10111313 ECH
Pste6g02134 6 10108229 10111313 Pste2g00748 2 7804755 7807664 PCT