Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00748 ATGATCCAACATTCATTTATGGGTTCCATTTGCATGTGTCATTTCATTCTACTACTGACCATAGTGTGCACTGTTGTTGTTGCAACTCTAGGAGAACACAACACAACAGATTCTTACTGGCTTCTAAGAATTAAATCAGAACTGGTTGATCCATTGAGAGCTCTGAGCAACTGGTCTCCAACAACTCATATTTGTAGTTGGAATGGACTGACATGTGCAGCTAATCAGACACATGTTGTCGGCCTTAATTTGTCTGGTGCAGGAATATCAGGTTCCATTTCAGGTGAGTTCAGTCACCTTATTTTTCTTCAAGCACTTGATTTGTCTTCAAATTCCCTCACAGGCTCCATCCCTTCTGAAATTGGGCAGCTTCAAAATCTAAGAACACTGCTGCTGTACTCGAATTATCTCTCCGGTAACATTCCTAAAGAGATAGGTAATTTAAGCAAGTTGCAAGTTCTTAGACTAGGAGATAACATGTTGGCTGGTGAACTGCCACCTAGTATTGGCAACTTGAGTGAGTTGTTAGTGTTAGGTGTAGCCAACTGCAACTTAACTGGAAGCATACCTGTTGAGGTTGGTAACTTGAGGCAACTAGTATCTCTTGATTTGCAAGTGAACAGTCTTAGTGGCCTCATACCTGAAGAGATTCAAGGCTGTGGAGAGCTACAAAATTTTGCAGCATCAAACAACATGTTTGAAGGAGAAATACCCTCTTCTGTGGGGTCTCTCATATCATTGAGAATTCTGAACCTGGCCAATAACACTCTATCTGGATCAATTCCTTCCTCTTTGAGTCTTCTCACCAATTTGACATACCTGAATTTGCTTGGAAACAATTTCAATGGAGAAATTCCTTCAGAGCTTAACAGTTTGGGCCAGATACAGAAGCTTGACTTATCCAGAAACAACCTTTCTGGATCACTAACACTCCTTAATACCAAACTACAGAATCTTGAAACCATGGTTCTGTCTGATAATGCTTTAACAGGCAGTATTCCACATAATTTCTGCCTCAGAGGTTCTAAACTTCAGCAACTGTTCTTGGCTAGAAATAAGCTATCTGGAAGATTTCCCTTGGAGCTACTCAACTGCTCCTCAATCCAACAGGTGGACCTTTCTGACAACAATTTTGAAGGTGTACTTCCATCCAACCTGGACCAACTACAGAACCTCACAGATCTTGTGCTCAACAACAACAGCTTCATCGGATCTCTACCTCCAGGAGTTGGAAATATTAGTAACTTGAGAAGCCTTTTCTTATTTGGAAACTTTTTCACAGGAAAAATCCCAGTGGAGATTGGAAGGCTTAAGAGGTTGAACACCATTTACCTCTATGATAACCAGATGTGCGGACCTATACCGAGAGAGTTAACAAACTGCACAAGCTTAACTGGAATTGACTTCTTCGGAAACCATTTTTCTGGTCCCATTCCGAAGACTATAGGTAAGCTAAAGGACTTAACTATTCTCCATTTAAGGCAAAATGACCTGGTAGGGCCAATCCCACCAAGCATGGGATACTGTAAAAAGCTTCAGTTATTGGCATTAGCAGATAACAAGTTGTCAGGATCTATACCACCCACATTCAGTTACCTTTCACAAATTAAGACCATTACCCTTTACAACAACTCCTTTGAAGGACCACTACCTGCTTCCCTCTCTCTTCTCAGAAACCTTAAAATCATAAATTTTTCCAATAACAAGTTCAGTGGAAGTATCTTTCCTCTTACTGGTTCAAATTCTCTCACTGTTTTGGACTTGACAAACAACAGCTTCTCAGGTTCCATCCCTTCTATTCTAGCCAACTCCAAAGATCTAACCCGTCTCAGACTTGCAAACAATTATCTCACAGGAACCATTCCTTCTGAGCTTGGCCACCTCACTGAGCTAAACTTCCTTGATTTATCATTCAACAACTTGACAGGACATGTGCCACCTCAACTCTCAAACTGCAAGAAAATTGAACACCTTCTACTGAACAATAACAGATTGAGTGGCGAAATGTCGCCGTGGTTAGGAAGCTTAGAAGAACTTGGTGAGCTAGATCTCTCATTCAACAACTTTCATGGAAGGGCACCTGCTGAGCTTGGTCGCTGCTCAAAGTTGCTTAAGCTTTCTCTCCATCACAACAACCTCTCAGGTGAAATCCCTCGAGAGATTGGAAACCTTACTTCACTCAATGTCTTCAACTTGCAAAGCAATAGTTTCTCTGGCCTCATTCCACCAACAATTCAGCAATGCACTAAGCTGTATGAGCTAAGTCTCTCAGAGAACTTCCTCTCAGGCAGTATACCAATTGAACTAGGAGGGCTCACTGAGCTTCAAGTCGTATTAGACTTGAGTAGAAACCTCTTTTCTGGTGAGATTCCATCATCTCTTGGAAATCTCATGAAGATAGAAAGACTTGATCTTTCTTTTAACAATCTTCAAGGACAAGTTCCTCCTTCTCTTGGTCAACTTACCAGCCTGCTTGTGCTAAATCTATCAAATAACCATCTTCATGGCCTCATTCCCTCAACTTTTTCAGGGTTCCCATTAAGCTCCTTTCTAAACAATGACCATTTGTGTGGCCCTCCACTAGCATTGTGCTCAGGAGCTACGGGGAAGGAGCGAATGCAGCTGTCTAACGCACAAGTAGCAGCAATCATAGTAGCCATTGTCCTTACTTCCACACTGATATGCTTAGTACTGTTCTATATAATGTTGAGAATGTGGGGCAACTGGATAAAGGTCGCTGTTTCAAGTGAAGATGGTGGTATGGTTGAGCAAAAGACAAGAAATGGAGAGTACTGGAATATGAATTCCCCTGAGTTGTTTCCTTCACCAGATAGACAAGTTTCAGCAAAAACTTGCATTTGTAATCTCAAAATTGATGCAGAAACCAAGGAAAATACCTTGGTCAGATAA 2910 0.4137 MIQHSFMGSICMCHFILLLTIVCTVVVATLGEHNTTDSYWLLRIKSELVDPLRALSNWSPTTHICSWNGLTCAANQTHVVGLNLSGAGISGSISGEFSHLIFLQALDLSSNSLTGSIPSEIGQLQNLRTLLLYSNYLSGNIPKEIGNLSKLQVLRLGDNMLAGELPPSIGNLSELLVLGVANCNLTGSIPVEVGNLRQLVSLDLQVNSLSGLIPEEIQGCGELQNFAASNNMFEGEIPSSVGSLISLRILNLANNTLSGSIPSSLSLLTNLTYLNLLGNNFNGEIPSELNSLGQIQKLDLSRNNLSGSLTLLNTKLQNLETMVLSDNALTGSIPHNFCLRGSKLQQLFLARNKLSGRFPLELLNCSSIQQVDLSDNNFEGVLPSNLDQLQNLTDLVLNNNSFIGSLPPGVGNISNLRSLFLFGNFFTGKIPVEIGRLKRLNTIYLYDNQMCGPIPRELTNCTSLTGIDFFGNHFSGPIPKTIGKLKDLTILHLRQNDLVGPIPPSMGYCKKLQLLALADNKLSGSIPPTFSYLSQIKTITLYNNSFEGPLPASLSLLRNLKIINFSNNKFSGSIFPLTGSNSLTVLDLTNNSFSGSIPSILANSKDLTRLRLANNYLTGTIPSELGHLTELNFLDLSFNNLTGHVPPQLSNCKKIEHLLLNNNRLSGEMSPWLGSLEELGELDLSFNNFHGRAPAELGRCSKLLKLSLHHNNLSGEIPREIGNLTSLNVFNLQSNSFSGLIPPTIQQCTKLYELSLSENFLSGSIPIELGGLTELQVVLDLSRNLFSGEIPSSLGNLMKIERLDLSFNNLQGQVPPSLGQLTSLLVLNLSNNHLHGLIPSTFSGFPLSSFLNNDHLCGPPLALCSGATGKERMQLSNAQVAAIIVAIVLTSTLICLVLFYIMLRMWGNWIKVAVSSEDGGMVEQKTRNGEYWNMNSPELFPSPDRQVSAKTCICNLKIDAETKENTLVR 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00748 969 SUPERFAMILY L domain-like 341 645 - -
Pste2g00748 969 Pfam Leucine Rich Repeat 824 845 IPR001611 GO:0005515
Pste2g00748 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 576 868 - -
Pste2g00748 969 Gene3D Ribonuclease Inhibitor 147 224 IPR032675 -
Pste2g00748 969 SMART LRR_typ_2 628 652 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 676 700 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 821 844 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 485 509 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 772 797 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 292 315 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 100 124 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 148 172 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 244 268 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 316 340 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 389 413 IPR003591 -
Pste2g00748 969 SMART LRR_typ_2 196 219 IPR003591 -
Pste2g00748 969 SUPERFAMILY L domain-like 35 334 - -
Pste2g00748 969 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Pste2g00748 969 Gene3D Ribonuclease Inhibitor 225 383 IPR032675 -
Pste2g00748 969 Gene3D Ribonuclease Inhibitor 509 868 IPR032675 -
Pste2g00748 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 479 575 - -
Pste2g00748 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 34 190 - -
Pste2g00748 969 ProSiteProfiles Leucine-rich repeat profile. 246 268 IPR001611 GO:0005515
Pste2g00748 969 PRINTS Leucine-rich repeat signature 628 641 - -
Pste2g00748 969 PRINTS Leucine-rich repeat signature 103 116 - -
Pste2g00748 969 Gene3D Ribonuclease Inhibitor 384 481 IPR032675 -
Pste2g00748 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 286 382 - -
Pste2g00748 969 SUPERFAMILY L domain-like 576 861 - -
Pste2g00748 969 PANTHER UNNAMED PRODUCT 12 109 - -
Pste2g00748 969 Gene3D Ribonuclease Inhibitor 37 146 IPR032675 -
Pste2g00748 969 FunFam Uncharacterized protein 191 285 - -
Pste2g00748 969 FunFam Uncharacterized protein 383 478 - -
Pste2g00748 969 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00748 Pste-Chr2 7804755 7807664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00748 50 865 Receptor kinase-like Gene Family AT5G46330 34.872 1.81e-122 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00748 2 7804755 7807664 Pste2g00748 2 7804755 7807664 ECH
Pste6g02134 6 10108229 10111313 Pste2g00748 2 7804755 7807664 PCT