Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02057 atgggtatgggtatgggtatgggtatggaagaggagggtagcaacagcaacgtagaaggtggtgcttcgctgccatcatcaggctcagacgctaagaagagaagagtgacgtacttctacgaacccaccatcggcgattactactacggccagggccacccaatgaagcctcaccgaatccgcatggcccacaacctcatcgtccactactccctccaccgccgcatggagattaaccgccccttcccggcatcccccgacgacattcgccgcttccactccgacgactacgtccacttcctctcctccgtctcccccgataccctcgccgactccgccttctcccgccacctcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctcttcaacttctgccaggcctcctccggcggctccatcggcgccgccgtcaaactcaaccgcgccgacgccgacatcgccatcaattgggccggcggcctccaccacgccaagaagtccgaggcctccggtttctgttacgtcaacgacattgtcctcggcatcctcgaactcctcaaagttcacaggcgagtgctgtatgttgatattgatgttcaccatggtgatggtgttgaggaggccttttacaccactgatagagtgatgacagtgtctttccataagtttggggacttcttccctggcacgggacacatcaaagacattggggtgggctcaggaaagaattatgctgttaatgtcccattaaatgacggaatggatgatgagaatttccgtggtctgtttcgaactatcattcaaaaagtcatggaggtttttcaacctgaggcagttgttcttcaatgtggagctgattcattgtctggtgacaggttgggttgcttcaacttgtctgtgagaggtcatgcagattgccttcgtttccttagatctttcaatgttcctttgatggtcttgggtgggggaggatatacaattcgaaatgttgcccgttgttggtgttacgagacagcagtggcagtaggagtggagcctgataataagttgccttataatgaatattatgaatattttggtccagattatactctatatgtcgatccaagcaacatggagaacctaaacacacccaaggatatggaaaaaataagatataaaacatttagtaacgcattcatggaaattgtgcctctgaacacactacttgagcagatttcccgacttccccatgctcccagtgtaccatttcagacaacaccacctaccgtacaaattccagaagaggtggaagtggatatggatagaagaccaaaacttcgcaaatgggatggtgaagactatgattctgatcccgatgaaggtgggaatgctaattccaaattctcaaacctcactgctcatatgagggacattgtagatgacatggaagaagacaagccagaagtgcatccatcatcttgttgttga 1485 0.0 MGMGMGMGMEEEGSNSNVEGGASLPSSGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPASPDDIRRFHSDDYVHFLSSVSPDTLADSAFSRHLKRFNVGEDCPVFDGLFNFCQASSGGSIGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKNYAVNVPLNDGMDDENFRGLFRTIIQKVMEVFQPEAVVLQCGADSLSGDRLGCFNLSVRGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYVDPSNMENLNTPKDMEKIRYKTFSNAFMEIVPLNTLLEQISRLPHAPSVPFQTTPPTVQIPEEVEVDMDRRPKLRKWDGEDYDSDPDEGGNANSKFSNLTAHMRDIVDDMEEDKPEVHPSSCC 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02057 494 SUPERFAMILY Arginase/deacetylase 34 393 IPR023696 -
Pste6g02057 494 CDD HDAC_classI 39 346 - -
Pste6g02057 494 Gene3D Histone deacetylase domain 32 402 IPR037138 -
Pste6g02057 494 PIRSF HDAC_I_euk 19 490 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PANTHER HISTONE DEACETYLASE 2-RELATED 24 359 - -
Pste6g02057 494 MobiDBLite consensus disorder prediction 418 474 - -
Pste6g02057 494 Pfam Histone deacetylase domain 53 344 IPR023801 -
Pste6g02057 494 FunFam Histone deacetylase 32 425 - -
Pste6g02057 494 PRINTS Histone deacetylase signature 121 138 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 183 199 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 242 255 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 55 72 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 142 162 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 259 277 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase signature 88 106 IPR003084 GO:0004407|GO:0016575
Pste6g02057 494 PRINTS Histone deacetylase superfamily signature 196 211 IPR000286 -
Pste6g02057 494 PRINTS Histone deacetylase superfamily signature 281 291 IPR000286 -
Pste6g02057 494 PRINTS Histone deacetylase superfamily signature 164 187 IPR000286 -
Pste6g02057 494 MobiDBLite consensus disorder prediction 1 30 - -
Pste6g02057 494 MobiDBLite consensus disorder prediction 434 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02057 Pste-Chr6 9657713 9661188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02057 6 9657713 9661188 Pste6g02057 6 9657713 9661188 ECH
Pste6g02057 6 9657713 9661188 Pste2g00575 2 5531237 5534330 PCT