Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00575 GGGAGAGAAAGAGTAAGGGGAAGAGAGAATTAGAGGGAAGGAGGGTTTGGTTAATGGCGAGAGGGGAGAGATCAGAGACGGAGAGTGGCGCATCGTTACCGTCGGTGGGTTCCGATGCGAGGAAGCGAAGAGTGACGTATTTCTACGAACCCTGCATCGGCGACTACTACTACGGCCAAGGTCACCCAATGAAGCCCCACCGCATTCGCATGGCCCACAACCTCATCGTCCACTACGGCCTCCACCGCCGCATGCAGGTCAACCGCCCCTTCCCCGCCGCCGAGTCCGACATCGGCCTCTTCCACTCCGACGACTACGTCGACTTCCTCGCCACCGTCTCCCCCCAAATCCTCTCCGAGAATTCCCACTCCCACTACCGCCAGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGATGGCCTCTTTGACTTCTGCCGCGCCTCCGCCGGTGGCTCCATCGGCGCCGCCGTCCGTATCAACCGCTGCGACGCCGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGGCCGAGGCCTCTGGCTTTTGCTACGTCAACGACATTGTTCTTGGCATTCTTGAACTTCTCAAAGTTCATAGGCGTGTGCTGTATATTGATATTGATGTTCACCATGGCGATGGCGTTGAGGAAGCATTTTACACTACTGATAGGGTGATGACAGTGTCATTTCATAAGTTTGGGGATTTTTTCCCTGGAACTGGGCACATTAAAGACATTGGGGTGGGTGCTGGAAAGAATTATTCTCTGAATGTTCCACTCAATGATGGGTTGGATGATGAGACTTTCTGTGGTCTGTTTCGTCCTATCATTCAAAAAGTCATGGATGTTTATCAACCGGATGCAGTTGTTCTTCAATGCGGAGCTGACTCGTTGTCGGGTGACCGGTTGGGTTGCTTCAACTTGACTGTGAAGGGGCATGCAGATTGTCTTCGTTTCCTTAGATCATTCAATGTTCCTCTAATGGTCTTAGGTGGGGGAGGATATACAGTTCGGAATGTTGCTCGATGTTGGTGTTATGAGACGGCTGTGGCAGTAGGAGTGGAGCCTAATCCTAAGTTACCTTACAATGAATATTATGAATATTTTGGCCCAGACTACGATCTTCATGTAGAGCCATCCAATATGGAAAACCTAAACACGCCTAGAGAGCTGGAAAAAATTCGGAATACATTACTAGAACAGCTTTCCAGGCTTCCCCATGCACCCAGTGCACCTTTTCAGACAACACCAACAGTCATACAAGTTCCAGACGAGGAAGAGGAGGACATGGATAGAAGACCAAAACGTCGCATATGGAGTGGTGAAGATTTTGATTCTGATCACGATGATGACATGGCTAGTTCAAAGAACTCTGATTTAACTTTCCAAACGAGGTAAGGGTTGTATATTGTTTTTGTTGAGAATCTTAGATATTATATTATATTATCTTTAATATTATATTGTTTTAATATTATACTATCTTGTTTTTAAATATAGTAGGTAGAAATAATATCTTTGAGGTTATACAAAATCATATCTTTATGAAATAAAGTTATAAATAGATCCATTTTGTGGGTATTCATATACACAG 1608 0.4726 MARGERSETESGASLPSVGSDARKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMQVNRPFPAAESDIGLFHSDDYVDFLATVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLFDFCRASAGGSIGAAVRINRCDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGKNYSLNVPLNDGLDDETFCGLFRPIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPNPKLPYNEYYEYFGPDYDLHVEPSNMENLNTPRELEKIRNTLLEQLSRLPHAPSAPFQTTPTVIQVPDEEEEDMDRRPKRRIWSGEDFDSDHDDDMASSKNSDLTFQTR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00575 453 Gene3D Histone deacetylase domain 16 405 IPR037138 -
Pste2g00575 453 SUPERFAMILY Arginase/deacetylase 25 392 IPR023696 -
Pste2g00575 453 FunFam Histone deacetylase 23 404 - -
Pste2g00575 453 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Pste2g00575 453 PRINTS Histone deacetylase superfamily signature 157 180 IPR000286 -
Pste2g00575 453 PRINTS Histone deacetylase superfamily signature 189 204 IPR000286 -
Pste2g00575 453 CDD HDAC_classI 30 339 - -
Pste2g00575 453 MobiDBLite consensus disorder prediction 414 443 - -
Pste2g00575 453 PRINTS Histone deacetylase signature 235 248 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 46 63 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 114 131 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 135 155 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 79 97 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 252 270 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 PRINTS Histone deacetylase signature 176 192 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 Pfam Histone deacetylase domain 44 337 IPR023801 -
Pste2g00575 453 PANTHER HISTONE DEACETYLASE 2-RELATED 14 353 - -
Pste2g00575 453 PIRSF HDAC_I_euk 8 452 IPR003084 GO:0004407|GO:0016575
Pste2g00575 453 MobiDBLite consensus disorder prediction 393 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00575 Pste-Chr2 5531237 5534330 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00575 2 5531237 5534330 Pste2g00575 2 5531237 5534330 ECH
Pste6g02057 6 9657713 9661188 Pste2g00575 2 5531237 5534330 PCT