Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02015 | atggccatggatccccacccaggaagtcatcccattctgtcgtacgtcatgtcccgtctcccttcgttcagtcccagaacccccagcgccaacgcctccacttcccattcccatatcgacatggaacaaccccctccttccgacccttcctcctccatcgttggccaaatgccaaatctaacagaccccgaaatgttggcctccatgactcgcgccatctccgacgtctcccaggcccgatccgtcttcaagctcatcggggcccgccccacccacgaggaggttgacaacgccaaggccaagatcgccgacctccaagcccatctctcccgccagctggaagagatcgtcgccctccccaggccccccgagatcgacgagcccacctggcgagcccacctcgccctcaaagaaaaggcctgcaaggattccgccgacaaagacatacgcattcacaagtccctcattcagctcgacaacatgcacgacgcctacggcaagctcctcaaggacgccgagaagcgccttgtcaagatttacgaggaccacggtgacaacgacaacgacaacgataacgacgacggtgacgaggtgaaggaacaggttcaagagatattgcatgaggcttacggcagaggaatggagcgagttgatctttccgggaagcgtctcaaacacctccctgaaggatttggccatattcctgctttggtcgtcctccacgtttccaacaatcaactttcggtcattcccgactccatatctggattgcaaaatctagaggaccttgatatctcttccaacgttttggcctcgctcccagattccattggcttgttacagaagttgaaattcctctatgtctctggtaacaagctcgctgcccttcctgattccatcagtcaatgcaggtcattggtggagctggatgcaagctttaacagcctcacatatttgccaactaacattggatatgagttgcttaatttacagaagctcttgattcagttgaacaagattagatctcttccctcctctatttgtgagatgaaatccttgcgctatttggatgctcactttaatgagctgcgcggccttcctattgcaattggcaaattgaccaatcttcaagttctcaacctgagcagcaacttcagtgacctgagacaacttccagccacttttggtgatctcattagcctcaaggaattggatctaagcaacaaccaaattcatgcacttcctgatacttttggtcgccttgataatttagtcaagctaaacttggatcagaatcctcttgaagtgccaccagtggagattgtagatcaaggggtccaggcagtaaagagtttcatgatccacagatggattgatatattggctgaggaagaaagaaaaagcacgcaagtgttgcaagaacaaggacagaatgactggttaacacgaagcacctcttggctcaagaatgtttctgaaaatgtaactgagatgattatgtcccccagatctcccaaggatgctattcttgatcaacagctatga | 1545 | 0.0 | MAMDPHPGSHPILSYVMSRLPSFSPRTPSANASTSHSHIDMEQPPPSDPSSSIVGQMPNLTDPEMLASMTRAISDVSQARSVFKLIGARPTHEEVDNAKAKIADLQAHLSRQLEEIVALPRPPEIDEPTWRAHLALKEKACKDSADKDIRIHKSLIQLDNMHDAYGKLLKDAEKRLVKIYEDHGDNDNDNDNDDGDEVKEQVQEILHEAYGRGMERVDLSGKRLKHLPEGFGHIPALVVLHVSNNQLSVIPDSISGLQNLEDLDISSNVLASLPDSIGLLQKLKFLYVSGNKLAALPDSISQCRSLVELDASFNSLTYLPTNIGYELLNLQKLLIQLNKIRSLPSSICEMKSLRYLDAHFNELRGLPIAIGKLTNLQVLNLSSNFSDLRQLPATFGDLISLKELDLSNNQIHALPDTFGRLDNLVKLNLDQNPLEVPPVEIVDQGVQAVKSFMIHRWIDILAEEERKSTQVLQEQGQNDWLTRSTSWLKNVSENVTEMIMSPRSPKDAILDQQL | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02015 | 514 | SUPERFAMILY | L domain-like | 214 | 434 | - | - | |
| Pste6g02015 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 400 | 421 | IPR001611 | GO:0005515 | |
| Pste6g02015 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 259 | 280 | IPR001611 | GO:0005515 | |
| Pste6g02015 | 514 | Gene3D | Ribonuclease Inhibitor | 333 | 453 | IPR032675 | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 327 | 346 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 234 | 253 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 257 | 276 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 303 | 322 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 280 | 299 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 350 | 369 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 373 | 394 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_bac_2 | 398 | 417 | - | - | |
| Pste6g02015 | 514 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 322 | 497 | - | - | |
| Pste6g02015 | 514 | Gene3D | Ribonuclease Inhibitor | 153 | 332 | IPR032675 | - | |
| Pste6g02015 | 514 | MobiDBLite | consensus disorder prediction | 24 | 59 | - | - | |
| Pste6g02015 | 514 | Coils | Coil | 95 | 115 | - | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 304 | 326 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 257 | 279 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 234 | 256 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 421 | 444 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 398 | 420 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 327 | 350 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 280 | 303 | IPR003591 | - | |
| Pste6g02015 | 514 | SMART | LRR_typ_2 | 373 | 397 | IPR003591 | - | |
| Pste6g02015 | 514 | MobiDBLite | consensus disorder prediction | 24 | 58 | - | - | |
| Pste6g02015 | 514 | Pfam | Leucine rich repeat | 375 | 434 | IPR001611 | GO:0005515 | |
| Pste6g02015 | 514 | Pfam | Leucine rich repeat | 235 | 293 | IPR001611 | GO:0005515 | |
| Pste6g02015 | 514 | PANTHER | - | 327 | 436 | - | - | |
| Pste6g02015 | 514 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 137 | 318 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02015 | Pste-Chr6 | 9423357 | 9431244 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g02015 | 243 | 439 | Receptor kinase-like Gene Family | AT5G56040 | 32.751 | 2.61e-14 | 73.9 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste6g02015 | 6 | 9423357 | 9431244 | Pste6g02015 | 6 | 9423357 | 9431244 | ECH | |
| Pste6g02015 | 6 | 9423357 | 9431244 | Pste2g00557 | 2 | 5296324 | 5300479 | PCT |