Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste2g00557 | GTGAGTGTGTTATCATTCGCTGATGGTTGAATTAAGTGCGTAAGGGCCATAAAGCTGGTTTCTCCACTTTTAATTGCTGCCATTGCACCAACGCTACCTTCTCGTCACTGTCCAATTTCGATTCCTTCTAAGGAAGGTTTTATTGTTATTTTCAAGGCTGCATTGAGTCAATTCGATTCGATATTATCCCAATTCATCGATTCCCTAAGCCCAATTCTCGCGCCATGGATCCTAACCCTGGAACGTTTCCCCTCCTCTCCTACGTCATGTCGCGCCTCCCTTCCCTCTCTCAAAGACCCGCCGGCGCCGGCGGTTCCGATTCTGACATCGAGCAGCCACGCGCCGCTCCGGAGATCGTCGTCCAAATGCCGCACCTGGCGGACCCCGACCTGGTGGCGTCGATGGGCCGGGCCGTGGCCCAGGTGGCCCAAACCCGGTCCATCCTGAAGCTCATCGGGGAGCGGCCCACGCACGAGGAGGTGGACAATGCCCGTGCGATGCTGGCCGAGATCGAGGCCCAGCTCTCCCGCGACCTGGAGGAGATCGTGCTGCAGGCCCGGCCCCAGGAGATCGGGATCCACGGGTGGCGGGCCCAGCAGGCGGAGAAGGAGAGGGAGTGCAGGGAACGGGCTGAGACGGAGAGGCGGCTGTGGAATTCGGTTGTGCAGCTGGACCAGATGCACGAAGAGTACGAGAAGCTTCTCAAGGACGCAGAGGAGCGATTGGTGAAAATGTACGAGTCCAAGGAAGAGGGCGACGCTGACGTGGCAGCTGACGAAATGAACAAAGAGGTTGTGGGGATTCTGCAAGAGGCTTCTGGCAAAGGAATCCAAACTCTCAATCTTTCTGGACGCCAATTGAAGCACTTGCCCGAGGCTTTCGGTCGAATTTCTGCCTTGCTTCTGCTTGATCTTTCAGCCAATCAACTCTCAGCAATTCCTGATTCGATAGCTGGATTGCAAAACCTTGAGGAGCTTAATCTGTCTTCAAATGTTTTGGAATCACTGCCAGATTCAATTGGGTTGTTACAAAAGCTGAAATTGCTGAATATCTCTGGAAACAAGCTGACTGCACTTCCTGATTCCATCTGTCAATGCAGGTCATTGGTGGAGTTGGATGTAAGCTTTAATAATCTATCGTATTTGCCAACAAACATTGGATATGAATTACCGAACTTGCAGAAACTCATCATTCAGTTGAACAAGGTTCGATCTCTTCCCTCATCCTTCTGTGAGTTGAAGTCTTTGCGCTATTTGGATGCTCATTTTAATGAGCTACACGGACTTCCAATTGCAATTGGGAGGCTGACCAATCTTGAAGTTCTCAACCTGAGCAGTAACTTCACTGACCTCAAAGAACTTCCCGAGACATTTGGTGATTTGACTAACCTTAGGGAATTGGATCTCAGCAATAATCAGATTGGTGCACTTCCTGATACATTTGGTCGCCTTGAAAATTTGACGAAGCTAAACTTGGAGCAGAATCCTCTTGAATTGCCACCAATGGAGATTGTAAATCAAGGGGTTGAAGCCGTAAAGACCTTTATGGCCAAGAGGTGGATTGATATATTGATGGAGGAAGAAACGAAAAGCAGCCAAGAAATGCGAGAACAAGAACAGGGTGATTGGTTATCAAGAAGCACCTCCTGGTTGAAGAATGTTTCTGGAAATGTAATTGGGTATATTGGAACGCCAATGTCATCAACCAAATCTCCAAAAGATGCATATCTTGATCAGGAGCTATGAGGTAAAGGCCAAGACATGGGGACTGTTATAATAGTATTTTAGAGGAATAATGTAGATACAGTGTGCTGCTAAGCAATAATCCCTGCTACTCCCTTGTTTGGTTCTCTGCCCCACCTAAAATAGCGTGGGTTGCTTTTCTTTCAGATATTTTTGTTTTACTTGGGCAATATCTGGATGAGAAATACAACTAATACACTTACTTTTCTCCACACATTTTTGTATCAGGTGAAATTCATGTAGATTTTACAATATATGCGAATTTCATTTTGAAATTATTGG | 2024 | 0.4743 | MDPNPGTFPLLSYVMSRLPSLSQRPAGAGGSDSDIEQPRAAPEIVVQMPHLADPDLVASMGRAVAQVAQTRSILKLIGERPTHEEVDNARAMLAEIEAQLSRDLEEIVLQARPQEIGIHGWRAQQAEKERECRERAETERRLWNSVVQLDQMHEEYEKLLKDAEERLVKMYESKEEGDADVAADEMNKEVVGILQEASGKGIQTLNLSGRQLKHLPEAFGRISALLLLDLSANQLSAIPDSIAGLQNLEELNLSSNVLESLPDSIGLLQKLKLLNISGNKLTALPDSICQCRSLVELDVSFNNLSYLPTNIGYELPNLQKLIIQLNKVRSLPSSFCELKSLRYLDAHFNELHGLPIAIGRLTNLEVLNLSSNFTDLKELPETFGDLTNLRELDLSNNQIGALPDTFGRLENLTKLNLEQNPLELPPMEIVNQGVEAVKTFMAKRWIDILMEEETKSSQEMREQEQGDWLSRSTSWLKNVSGNVIGYIGTPMSSTKSPKDAYLDQEL | 506 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste2g00557 | 506 | ProSiteProfiles | Leucine-rich repeat profile. | 270 | 291 | IPR001611 | GO:0005515 | |
| Pste2g00557 | 506 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 128 | 306 | - | - | |
| Pste2g00557 | 506 | SUPERFAMILY | L domain-like | 199 | 427 | - | - | |
| Pste2g00557 | 506 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 310 | 483 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 338 | 357 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 268 | 287 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 386 | 405 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 222 | 241 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 315 | 334 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 291 | 310 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 361 | 382 | - | - | |
| Pste2g00557 | 506 | SMART | LRR_bac_2 | 245 | 264 | - | - | |
| Pste2g00557 | 506 | PRINTS | Leucine-rich repeat signature | 386 | 399 | - | - | |
| Pste2g00557 | 506 | PRINTS | Leucine-rich repeat signature | 225 | 238 | - | - | |
| Pste2g00557 | 506 | PANTHER | DISCS LARGE | 210 | 433 | - | - | |
| Pste2g00557 | 506 | Pfam | Leucine rich repeat | 247 | 304 | IPR001611 | GO:0005515 | |
| Pste2g00557 | 506 | Pfam | Leucine rich repeat | 363 | 422 | IPR001611 | GO:0005515 | |
| Pste2g00557 | 506 | ProSiteProfiles | Leucine-rich repeat profile. | 388 | 409 | IPR001611 | GO:0005515 | |
| Pste2g00557 | 506 | Gene3D | Ribonuclease Inhibitor | 318 | 438 | IPR032675 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 338 | 360 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 245 | 267 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 268 | 291 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 386 | 408 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 292 | 314 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 222 | 244 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 361 | 385 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 315 | 337 | IPR003591 | - | |
| Pste2g00557 | 506 | SMART | LRR_typ_2 | 409 | 432 | IPR003591 | - | |
| Pste2g00557 | 506 | Coils | Coil | 146 | 173 | - | - | |
| Pste2g00557 | 506 | Coils | Coil | 86 | 106 | - | - | |
| Pste2g00557 | 506 | Gene3D | Ribonuclease Inhibitor | 98 | 317 | IPR032675 | - | |
| Pste2g00557 | 506 | ProSiteProfiles | Leucine-rich repeat profile. | 247 | 268 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste2g00557 | Pste-Chr2 | 5296324 | 5300479 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste2g00557 | 215 | 430 | Receptor kinase-like Gene Family | AT3G51740 | 33.184 | 4.06e-18 | 85.9 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste2g00557 | 2 | 5296324 | 5300479 | Pste2g00557 | 2 | 5296324 | 5300479 | ECH | |
| Pste6g02015 | 6 | 9423357 | 9431244 | Pste2g00557 | 2 | 5296324 | 5300479 | PCT |