Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01929 ATGGCTGGAGACACATCGTGGACCAGCCACTACGAAGATGGTTCGCGAAGGGAGACTAGGGAATTTGATTCTTTTTTGGAATTTGGTGAGGAAATTGATAAAGAAGGAACTGCTGTTTCTGTGGACACACTTTTGCCTGATGAATTGGTGGAGCTTATCCTAGCCTATCTCCCCATTGCAAGCATTTTCAGAGCAGGTTGTGTGTGTAAGAGATGGTATGAGATTATTACTTCTGATAAGTTTTTGTGGAATCCTTCCAATTCACTGCCACAGAAACCTTGGTACTTTATGTTTACCAACTCAGATGAACCAACTGGTTATGCTTATGACCCCATGCTTCGGAAATGGTATGGCATTGAAATGCCATTTATTGAAACTTCTAATTGGTTCATTGCTTCATCTTACGGTTTAGCTTGCTTCATGGACAATGATAGCAGAAGCAAATTATGCATGTGCAACCCTATCACCAAAATGTTCAGGAAGCTTGAGGAGCCTCCAGGTTTGAAATTTTCTGATTACAGTGCATTGGCGATGTCAGTGAACAGGAAGTCCCTCAGTTACACTGTGGCAATTGTGAAATCAAAACAAATCCCTCAGGATTTTGTCCAGTGGGATATATCAATTCATTTATATGATTCAACGCAAGAAACCTGGATAACTAAGTTAACAGAGGTTTTGATGGGTTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGGTGTGCTATACTTTTTAGTTTACTCAGCTGGAGGTGTCCCATCAGACAGTAGGCATGCCTTGATCGCATATAATATCTCCAATCGCTCTTCACAAGCTAGCTTGAGAAGCAGCTTTATTGCTGCACCTTGTTCTCTCACATGTGGCCGTCTGATGAATATGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGTAAGCCTGATAGGCCTGACATAATAAAAGGGATTGGCATCTGGGTTCTTAATGATAGGAAGTGGGAAGAGACTGTTAGAATGCCCCACAAATACTTCCAAGGCTTTGGGGAGTTTGATGATGTTTTTGCCAGCTGTGGTACAGATGATCTAATTTATATTCAAAGTTATGGATCTCCAGCACTTCTCACATTTGACATGAAACTCAAACAATGGAAGTGGTCACAGAAATGCCCAGTAACAAAGAGGTTTCCTCTACAGCTTTTCACTGGCTTTTGCTTTGAGCCTAGGCTTGAAATTGCTCCATAG 1218 0.4171 MAGDTSWTSHYEDGSRRETREFDSFLEFGEEIDKEGTAVSVDTLLPDELVELILAYLPIASIFRAGCVCKRWYEIITSDKFLWNPSNSLPQKPWYFMFTNSDEPTGYAYDPMLRKWYGIEMPFIETSNWFIASSYGLACFMDNDSRSKLCMCNPITKMFRKLEEPPGLKFSDYSALAMSVNRKSLSYTVAIVKSKQIPQDFVQWDISIHLYDSTQETWITKLTEVLMGWRGGNESVICNGVLYFLVYSAGGVPSDSRHALIAYNISNRSSQASLRSSFIAAPCSLTCGRLMNMKEKLVMVGGIGKPDRPDIIKGIGIWVLNDRKWEETVRMPHKYFQGFGEFDDVFASCGTDDLIYIQSYGSPALLTFDMKLKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01929 405 SUPERFAMILY F-box domain 43 140 IPR036047 GO:0005515
Pste6g01929 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Pste6g01929 405 CDD F-box_AtFBW1-like 45 81 - -
Pste6g01929 405 PANTHER F-BOX FAMILY PROTEIN 17 402 IPR045048 -
Pste6g01929 405 FunFam F-box/kelch-repeat protein At3g61590 38 85 - -
Pste6g01929 405 SUPERFAMILY Galactose oxidase, central domain 67 383 IPR011043 -
Pste6g01929 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Pste6g01929 405 Gene3D - 36 85 - -
Pste6g01929 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Pste6g01929 405 FunFam F-box/kelch-repeat protein At3g61590 family 91 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01929 Pste-Chr6 8925205 8926422 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01929 6 8925205 8926422 Pste6g01929 6 8925205 8926422 ECH
Pste5g03397 5 27380861 27383790 Pste6g01929 6 8925205 8926422 PCT