Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03397 GGCTTCATGGTTATGGAATTTTTTTTTGTGGCCATTGCTGTTTTTTGTGCAGAAACTATCACTGTATTTCGATCAATAGGCTTTCTTCCAAGAGTTGTGATGCAATATATTTCCTCTGCCATGTGGGTTTCTAAATTACAGAAGAAGAGGATGGAAGCTTTAATAATCTCATTTTTCCTTTTTTGCTTTACTATACCCACTAGGTCTTTCCTTCCAACTCCTATGGCGGGAGAAACATCTTGGATCAGCCACTATGATGACAGACAAAGGGAGACTGGGGCATATGATTCATTTTTAGAACTTGGCGAGGAGGGTGAAAAAGAAGCAACTGTTGTTTCTCTGGATGTAATTTTACCTGATGACTTGTTGGAACGAATCCTAGCCTATCTCCCCATTGCAAGCATTTTTAGAGCTGGTTGTGTGTCTAAGAGATGGCATGAAATTGTTAATTCAGAGAGGTTTTTATGGAACCTTTCAAATGTTCTACCACAGAAACCTTGGTACTTTATGTTTACAAACTCTGATGAACCAATTGGTTATGCTTTTGATCCCGTCCTTCGGAAATGGTATGGCATTGAGCTTCCATGCATTGGAACTTCTAATTGGTTCATTGCATCATCATGTGGCATGGTGTGCTTCATGGACAATGACAGCAGAAGTGAATTATGCATCTGCAACCCAATTACCAAAACCTACAGGAAGCTTGAGGAACCTCCAGGATTGAAATTTTCTGATTACAGTGCATTGGCAATCTCAGTCAACAGGGAATCTCACGGTTATACTGTGACAATTGTAAAATCTAAACAAGTCCCTGAGAACTTTTTCCAGTGGGATATCTCAATTCATATATACAAATCAGAAAATGCAGCCTGGGTGACCTCTTTAACAGAAGTTTTGATGGGGTGGAGAGGTGGTGACGAAAGTGTGATATGCAACGGGATGTTATACTTTTTAGTTTATTCAACTGGCGGTGGCCAACTGGAAAATCGACATGCTCTGATTGCATATAACATGTCCAATCGTTCTTCACAAGCTTCCTTAACAAGGAACTTTATTGCAGTACCTTGTTCCCTAACATGTGGCCGTCTGATGAATCTGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGTAAACCAGATCGACCTGACATAATAAAAGGAATTGGTATCTGGGTTCTAAATGATAAGAAGTGGGAAGAGATTGCTCGAATGCCCCACAAGTTCTTCCAAGGCTTTGGAGAGTTTGATGATGTTTTTGCGAGCAGTGGTGCAGATGATCTGATATATATCCAGAGTTATGGAGCTCCGGCGCTTCTCGTATTTGACATGAACCATAAACAATGGAAATGGTCACATAAGTGCCCTGTTACAAAAAGATTCCCACTGCAGCTTTTCACTGGCTTTTGCTTTGAGCCTAGACTTGAAATTGCTCCATAG 1437 0.4071 GFMVMEFFFVAIAVFCAETITVFRSIGFLPRVVMQYISSAMWVSKLQKKRMEALIISFFLFCFTIPTRSFLPTPMAGETSWISHYDDRQRETGAYDSFLELGEEGEKEATVVSLDVILPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFLWNLSNVLPQKPWYFMFTNSDEPIGYAFDPVLRKWYGIELPCIGTSNWFIASSCGMVCFMDNDSRSELCICNPITKTYRKLEEPPGLKFSDYSALAISVNRESHGYTVTIVKSKQVPENFFQWDISIHIYKSENAAWVTSLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQLENRHALIAYNMSNRSSQASLTRNFIAVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWVLNDKKWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGAPALLVFDMNHKQWKWSHKCPVTKRFPLQLFTGFCFEPRLEIAP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03397 478 FunFam F-box/kelch-repeat protein At3g61590 family 164 462 - -
Pste5g03397 478 CDD F-box_AtFBW1-like 118 154 - -
Pste5g03397 478 Gene3D - 117 156 - -
Pste5g03397 478 Pfam F-box-like 118 157 IPR001810 GO:0005515
Pste5g03397 478 SUPERFAMILY F-box domain 117 217 IPR036047 GO:0005515
Pste5g03397 478 SMART fbox_2 118 158 IPR001810 GO:0005515
Pste5g03397 478 NCBIfam F-box protein interaction domain 208 406 IPR017451 -
Pste5g03397 478 PANTHER F-BOX FAMILY PROTEIN 106 475 IPR045048 -
Pste5g03397 478 FunFam F-box/kelch-repeat protein At3g61590 111 158 - -
Pste5g03397 478 SUPERFAMILY Galactose oxidase, central domain 171 456 IPR011043 -
Pste5g03397 478 ProSiteProfiles F-box domain profile. 118 158 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03397 Pste-Chr5 27380861 27383790 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03397 5 27380861 27383790 Pste6g01929 6 8925205 8926422 PCT