Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01850 TAAAGCTCAAGGAAAAGCCAAAAATTAAAGCTCATAATTTCCTCTCTGATTTCTATTACTTTGTTGTTTTGTTCTCGGACTTCATCTACTGCCAATTTGGTTCTTTTCTTTCATTTTCTACATCGTTTTCGACTGCTTAACGTTTCCCTTTATTGTGGTTTTTCCTTTGGTTCAGAGCATCCTTTGAAAGTGCATTTGTCCTGTTTCTGGCATTTAATTTTCGGAAATTATTCATTGGGTCCTATTGCCAGCAAAATAAGGAGGGAAGATCACAACACCGGAAAATATTAATTATGATATTAAGTAAAATAAATATAAAACCTTAATTGAGCGGTTCAGTTTGGCTTTATCCATATTTTTCTTCTGTAATGCGATATAGCCTTATTCATGCTGTTTGGCTTTATCAGAATTGTTTCTTTATGTAAATCAATTACTCCCCCCTTTTTTGCTGCATAGGACTAACATTTATAGAGGTTGCAGAGAAATAATAAAGAGTCATAACCCAATCTCATTACTCGTCTATTTATCATTGAGTGTTTTTTTCCTTCTTCTTTCATGATAGCTGCAGCTGAAGGACTGTGAAGATGTTGGAGAAAGTGGAAGGATTTGACATGGAGAGAGTGATAGAGGAATTTGAGAGGGTAACAAAGGATGCTGAGAGGATTCAAAGGGAAACGCTGAAAAGGATTTTGGAAGATAACGCTTCTGCTGAGTACTTGCTCAATTTGGGTCTGAATGGGAGGACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTTGTCACTCACCAAGATTTGGAGCCTTATATCAATAGGATACTTGATGGGGATGATTCTTCAGTTCTCACTGGCAAACCCATCACAATCATGTCTTTGAGCTCCGGCACAACTCAGGGGAAGCCAAAATATGTTCCATGGAACGATGAATTGTTTGACACCACATTGCAGATATATTACACCTCCTTTGCCTTTAGGAACAGAGAATTTCCTATAAACAATGGCAAGGCTTTGGGCTTTATCTACAGCAGCAAGCAGTTCAGAACCAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTCCGCAATCCGGGGTTTAGGCATACAATGAAGTCAATTCAGTCCCCATTTTGCAGTCCTGAAGAAGTTATATTTGGTGCTGATTTTCACCAATCATTGTACTGCCACCTCTTGTGTGGGCTAATATTCAGAGAAGAAGTTCGGTTGGTGTCTTCCACATTTGCACACAGCATTGTCTATGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGGGTCCTTAACAGCAAGATCACAGTTCCATCCGTTAGGACTGCCATGTCTAAACTGCTCAAACCTGACCCTGAGTTGGCCAACTTGATCCACAAAAAGTGCATGGGACTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTCCAGGGGATCATGACTGGGTCAATGGAACCTTATTTGAAAAAGTTAAGGCATTATGCTGGTGAGTTGCCTTTGTTGACTTCTGATTATGGGTCTTCTGAAGGGTGGATAGGAACAAATGTGAAACCAACAGTGCCACCTGAATTGGCCACTTACACGGTACTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTAAGAGAGCTGGAGGGAGCTATGGGAGATACTAATTTCCTTTGTATGGATCCTAAGCCAGTGGGCCTCACTGATGTGAAGGTTGGTGAGGAGTATGAGATTGTCATCACTAATCCAGCAGGCTTGTACCGGTACCGACTTGGTGATGTAGTCAGGGTTATGGGGTTCCATAACTCAGCTCCAGAAATCAAGTTTGTTCGGCGTAGCAGTCTTCTTCTCACCATCAACATTGACAAGAACACAGAGCAAGATTTGCAGTTAGCTGTGGAAGCAGCTTCCCAATTGTTGGCTGAGGAGAAATTGGAAGTTGTTGACTACACTAGCCACATAGATTTATCCAAAGATCCAGGACACTATGTTATCTTCTGGGAAATCAATGGGGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGTTTGGACAAGTCTTTTGTTGATGCTGGCTACACTAGTTCTCGCAAAGTCAACTGCATTGGGGCCCTTGAACTCCGAGTTGTCAGAAGAGGAACATTCCAGAAGATACTAGAGCATTCCCTAACACTGGGAGCTGCTGGGAGTCAGTTCAAGACACCAAGATGTGTAGGTCCTACTAACACCAAAGTGTTACAAATATTGAATGAAAATGTTGTCAAGAACTACCTCAGTACTGCCTTCAATTGAATAAAATTTAGAAATAGCCTTCTATATATAATATATATGGTTGCCTT 2380 0.4147 MLEKVEGFDMERVIEEFERVTKDAERIQRETLKRILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHQDLEPYINRILDGDDSSVLTGKPITIMSLSSGTTQGKPKYVPWNDELFDTTLQIYYTSFAFRNREFPINNGKALGFIYSSKQFRTKGGVLAGTATTNVFRNPGFRHTMKSIQSPFCSPEEVIFGADFHQSLYCHLLCGLIFREEVRLVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKITVPSVRTAMSKLLKPDPELANLIHKKCMGLSNWYGLIPELFPNVKYVQGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEFIPLRELEGAMGDTNFLCMDPKPVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVRVMGFHNSAPEIKFVRRSSLLLTINIDKNTEQDLQLAVEAASQLLAEEKLEVVDYTSHIDLSKDPGHYVIFWEINGEASEEVLGGCCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILEHSLTLGAAGSQFKTPRCVGPTNTKVLQILNENVVKNYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01850 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Pste6g01850 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Pste6g01850 582 Coils Coil 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01850 Pste-Chr6 8503126 8506681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01850 17 579 EF-hand Containing Proteins AT1G23160 38.754 1.34e-133 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01850 6 8503126 8506681 Pste6g01850 6 8503126 8506681 ECH
Pste5g03433 5 27647926 27651211 Pste6g01850 6 8503126 8506681 PCT